CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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SapurV1A.0554s0220
(
Salix purpurea
)
FAR1
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF03101 (FAR1)
IPR004330
SapurV1A.0554s0220
T181925_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
SapurV1A.0554s0220.1.p
FAR1
79
167
IFYNSYARRVGFSTRVSVYQRSRRDGSIICRQIVCSREGFRREGNENRSKRQRTVTRVGCKAQMTVKKQSSGKWAVTKLVKDHNHEFVP
Links
Other
FAR1
family TFs
Other
Salix purpurea
TFs
12 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
POPTR_0005s27900
Populus trichocarpa
POPTR_0005s27900
N
0.978
PRUPE_ppa026999mg
Prunus persica
PRUPE_ppa026999mg
N
0.910
TCM_034806
Theobroma cacao
TCM_034806
N
0.876
VIT_18s0122g00530
Vitis vinifera
VIT_18s0122g00530
N
0.933
cassava23935.valid.m1
Manihot esculenta
cassava23935.valid.m1
N
0.921
Aquca_007_00963
Aquilegia coerulea
Aquca_007_00963
N
0.756
Ciclev10000383m.g
Citrus clementina
Ciclev10000383m.g
N
0.888
Eucgr.F03610
Eucalyptus grandis
Eucgr.F03610
N
0.789
evm.TU.contig_24967.4
Carica papaya
evm.TU.contig_24967.4
N
0.910
gene29166-v1.0-hybrid
Fragaria vesca
gene29166-v1.0-hybrid
N
0.933
MDP0000722905
Malus domestica
MDP0000722905
N
0.921
orange1.1g004450m.g
Citrus sinensis
orange1.1g004450m.g
N
0.888