foxp1a (Tetraodon nigroviridis)
Forkhead

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00250 (Forkhead) IPR001766 ENSTNIG00000012565 T187201_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
FOXP1
M00836_2.00 		Homo sapiens
NRTMAACANN
NNTGTTKAYN		 PBM
Gabut et al.(2011)
pEX0123 		0.771 0.889
FOXP1
M00837_2.00 		Homo sapiens
DGTAAACAA
TTGTTTACH		 PBM
Gabut et al.(2011)
pEX0124 		0.771 0.889
FOXP1
M01976_2.00 		Homo sapiens
RTAAACAA
TTGTTTAY		 PBM
Weirauch et al.(2014)
pTH5656 		0.771 0.889
Foxp1
M00793_2.00 		Mus musculus
NRTMAAYAN
NTRTTKAYN		 PBM
Weirauch et al.(2013)
pTH3855 		0.771 0.889
FOXP1
M04811_2.00 		Homo sapiens
NTGTTTRYNRTNNNNNNBNAYRVWMAACAN
NTGTTKWBYRTNVNNNNNNAYNRYAAACAN		 SELEX
Yin et al.(2017)
FOXP1_eDBD_HT-SELEX 		0.771 0.889
FOXP1
M08115_2.00 		Homo sapiens
NDGTAAACAVNN
NNBTGTTTACHN		 ChIP-seq
Mathelier et al.(2014)
MA0481.2 		0.771 0.889
FOXP1
M09086_2.00 		Homo sapiens
RKAAACAVM
KBTGTTTMY		 Misc
Kulakovskiy et al.(2013)
FOXP1_HUMAN.H11MO.0.A 		0.771 0.889
FOXP1
M09541_2.00 		Homo sapiens
NDGTAAACAVNN
NNBTGTTTACHN		 Misc
Heinz et al.(2010)
H9-FOXP1_GSE31006 		0.771 0.889
FOXP1
M10536_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$FOXP1_01 		0.771 0.889
FOXP1
M04812_2.00 		Homo sapiens
NTGTTTRYBRTNNNNNNBNAYRVWMAACAH
DTGTTKWBYRTNVNNNNNNAYVRYAAACAN		 SELEX
Yin et al.(2017)
FOXP1_eDBD_Methyl-HT-SELEX 		0.771 0.889
FoxP
M03753_2.00 		Drosophila melanogaster
AAACAACAACAA
TTGTTGTTGTTT		 SELEX
Nitta et al.(2015)
CG16899_1 		0.713 0.728
FoxP
M06201_2.00 		Drosophila melanogaster
VRTAAACAA
TTGTTTAYB		 B1H
Zhu et al.(2011)
CG16899_SANGER_5_FBgn0037735 		0.713 0.728
FoxP
M06202_2.00 		Drosophila melanogaster
VNNVBBAAAAAAAD
HTTTTTTTVVBNNB		 B1H
Zhu et al.(2011)
CG2052_SANGER_2.5_FBgn0039905 		0.713 0.728
FoxP
M06203_2.00 		Drosophila melanogaster
NNNNNRAAAAAAWNN
NNWTTTTTTYNNNNN		 B1H
Zhu et al.(2011)
CG2052_SOLEXA_2.5_FBgn0039905 		0.713 0.728
Foxp2
M00792_2.00 		Mus musculus
RTAAACAD
HTGTTTAY		 PBM
Weirauch et al.(2013)
pTH1288 		0.702 0.840
FOXP2
M05866_2.00 		Homo sapiens
RTAAAYAWNN
NNWTRTTTAY		 SMiLE-seq
Isakova et al.(2017)
FOXP2 		0.702 0.840
FOXP2
M08116_2.00 		Homo sapiens
NDGTAAACAVN
NBTGTTTACHN		 ChIP-seq
Mathelier et al.(2014)
MA0593.1 		0.702 0.840
FOXP2
M09089_2.00 		Homo sapiens
DGTAAACAV
BTGTTTACH		 Misc
Kulakovskiy et al.(2013)
FOXP2_HUMAN.H11MO.0.C 		0.702 0.840
Foxp2
M09101_2.00 		Mus musculus
NGTAAACAN
NTGTTTACN		 Misc
Kulakovskiy et al.(2013)
FOXP2_MOUSE.H11MO.0.A 		0.702 0.840
Foxj3
M00160_2.00 		Mus musculus
NRTAAACAHN
NDTGTTTAYN		 PBM
Badis et al.(2009)
Foxj3_0982 		0.672 0.457
Foxj3
M01981_2.00 		Mus musculus
VNHHAYANN
NNTRTDDNB		 PBM
Weirauch et al.(2014)
pTH6591 		0.672 0.457
Foxj3
M03055_2.00 		Mus musculus
ACGGACACAAT
ATTGTGTCCGT		 SELEX
Jolma et al.(2013)
Foxj3_1 		0.672 0.457
Foxj3
M03056_2.00 		Mus musculus
GTAAACARTMAACA
TGTTKAYTGTTTAC		 SELEX
Jolma et al.(2013)
Foxj3_2 		0.672 0.457
Foxj3
M03057_2.00 		Mus musculus
RTAAACAW
WTGTTTAY		 SELEX
Jolma et al.(2013)
Foxj3_3 		0.672 0.457
Foxj3
M03058_2.00 		Mus musculus
RTAAACAWAAACA
TGTTTWTGTTTAY		 SELEX
Jolma et al.(2013)
Foxj3_4 		0.672 0.457
Foxj3
M09102_2.00 		Mus musculus
WAAMMATAAACAN
NTGTTTATKKTTW		 Misc
Kulakovskiy et al.(2013)
FOXJ3_MOUSE.H11MO.0.A 		0.672 0.457
FOXJ3
M03046_2.00 		Homo sapiens
RTAAAVAA
TTBTTTAY		 SELEX
Jolma et al.(2013)
FOXJ3_1 		0.671 0.457
FOXJ3
M03047_2.00 		Homo sapiens
GTAAACARTMAACA
TGTTKAYTGTTTAC		 SELEX
Jolma et al.(2013)
FOXJ3_2 		0.671 0.457
FOXJ3
M03048_2.00 		Homo sapiens
GTAAACATAAACA
TGTTTATGTTTAC		 SELEX
Jolma et al.(2013)
FOXJ3_3 		0.671 0.457
FOXJ3
M02736_2.00 		Homo sapiens
AAACAATAAACA
TGTTTATTGTTT		 SELEX
Jolma et al.(2010)
FOXJ3_dimer 		0.671 0.457
FOXJ3
M02737_2.00 		Homo sapiens
RTAAACAW
WTGTTTAY		 SELEX
Jolma et al.(2010)
FOXJ3_monomer 		0.671 0.457
FOXJ3
M04859_2.00 		Homo sapiens
DYGTMAACAH
DTGTTKACRH		 SELEX
Yin et al.(2017)
FOXJ3_eDBD_HT-SELEX 		0.671 0.457
FOXJ3
M09098_2.00 		Homo sapiens
WAAMMATAAACAN
NTGTTTATKKTTW		 Misc
Kulakovskiy et al.(2013)
FOXJ3_HUMAN.H11MO.0.A 		0.671 0.457
FOXJ3
M04860_2.00 		Homo sapiens
RYGTMAACAH
DTGTTKACRY		 SELEX
Yin et al.(2017)
FOXJ3_eDBD_Methyl-HT-SELEX 		0.671 0.457
For this family, TFs with SR scores > 0.664 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSTNIP00000015534 Forkhead 363 445

Links

Other Forkhead family TFs
Other Tetraodon nigroviridis TFs

392 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
NEMVEDRAFT_v1g80394 Nematostella vectensis NEMVEDRAFT_v1g80394 D
CAD25284 Encephalitozoon cuniculi CAD25284 D
CG15696 Drosophila melanogaster FBgn0038833 D
Esx1 Mus musculus ENSMUSG00000023443 D
LCUP001362 Lucilia cuprina LCUP001362 I
ADIR008273 Anopheles dirus ADIR008273 I
ACUA003130 Anopheles culicifacies ACUA003130 I
ACOM028352 Anopheles coluzzii ACOM028352 I
AATE008808 Anopheles atroparvus AATE008808 I
AARA001486 Anopheles arabiensis AARA001486 I
AALB003384 Anopheles albimanus AALB003384 I
AFAF007403 Anopheles farauti AFAF007403 I
gw.35.233.1 Branchiostoma floridae gw.35.233.1 I
e_gw.35.232.1 Branchiostoma floridae e_gw.35.232.1 I
YQE_12606 Dendroctonus ponderosae YQE_12606 I
TriadG51739 Trichoplax adhaerens TriadG51739 I
tetur05g02800 Tetranychus urticae tetur05g02800 I
AEPI009779 Anopheles epiroticus AEPI009779 I
D915_03631 Fasciola hepatica D915_03631 I
AFUN002303 Anopheles funestus AFUN002303 I
AMEC009026 Anopheles melas AMEC009026 I
AMEM013111 Anopheles merus AMEM013111 I
AMIN003870 Anopheles minimus AMIN003870 I
AQUA010265 Anopheles quadriannulatus AQUA010265 I
ASIS007877 Anopheles sinensis ASIS007877 I
ASTEI03376 Anopheles stephensi ASTEI03376 I
LLOJ009601 Lutzomyia longipalpis LLOJ009601 I
MDOA010523 Musca domestica MDOA010523 I
A_06265 Schistosoma haematobium A_06265 I
CpipJ_CPIJ003723 Culex pipiens CpipJ_CPIJ003723 I
GG24188 Drosophila erecta FBgn0085045 I
AAEL003158 Aedes aegypti AAEL003158 I
ACYPI28321 Acyrthosiphon pisum ACYPI28321 I
ADAC003085 Anopheles darlingi ADAC003085 I
AGAP003406 Anopheles gambiae AGAP003406 I
CPIJ003723 Culex quinquefasciatus CPIJ003723 I
EHEL_040890 Encephalitozoon hellem EHEL_040890 I
Eint_040940 Encephalitozoon intestinalis Eint_040940 I
ENSCAFG00000023214 Canis familiaris ENSCAFG00000023214 I
Esx1 Rattus norvegicus ENSRNOG00000048011 I
EROM_040930 Encephalitozoon romaleae EROM_040930 I
GA13896 Drosophila pseudoobscura FBgn0073928 I
GE25692 Drosophila yakuba FBgn0084486 I
TC015928 Tribolium castaneum TC015928 I
GF17994 Drosophila ananassae FBgn0095012 I
GH15916 Drosophila grimshawi FBgn0123387 I
GI10602 Drosophila mojavensis FBgn0133366 I
GL24283 Drosophila persimilis FBgn0161873 I
GJ22956 Drosophila virilis FBgn0210059 I
GK22474 Drosophila willistoni FBgn0224451 I
GB43703 Apis mellifera GB43703 I
LotgiG169884 Lottia gigantea LotgiG169884 I
MESCA004778 Megaselia scalaris MESCA004778 I
ML021120a Mnemiopsis leidyi ML021120a I
Smp_000075 Schistosoma mansoni Smp_000075 I