CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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GK10997
(
Drosophila willistoni
)
Forkhead
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00250 (Forkhead)
IPR001766
FBgn0213008
T187562_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
fkh
M03734_2.00
Drosophila melanogaster
WRWGYMAATATTKRCWYW
WRWGYMAATATTKRCWYW
SELEX
Nitta et al.(2015)
fkh_1
0.893
1.000
fkh
M03735_2.00
Drosophila melanogaster
HWASAATAAYAWT
AATRTTATTSTWD
SELEX
Nitta et al.(2015)
fkh_2
0.893
1.000
fkh
M06473_2.00
Drosophila melanogaster
NTRDDYAAACA
TGTTTRHHYAN
B1H
Mathelier et al.(2014)
MA0446.1
0.893
1.000
fkh
M06194_2.00
Drosophila melanogaster
NTRDDYAAACA
TGTTTRHHYAN
B1H
Zhu et al.(2011)
fkh_NAR_FBgn0000659
0.893
1.000
fkh
M08200_2.00
Drosophila melanogaster
NTRDDYAAACA
TGTTTRHHYAN
ChIP-seq
Contrino et al.(2012)
Mf15
0.893
1.000
fkh
M09668_2.00
Drosophila melanogaster
TRTTTRCAHAAG
CTTDTGYAAAYA
Misc
Kulakovskiy et al.(2009)
fkh
0.893
1.000
Foxa2
M00162_2.00
Mus musculus
GTAAAYAW
WTRTTTAC
PBM
Badis et al.(2009)
Foxa2_2830
0.835
0.907
FOXA2
M04815_2.00
Homo sapiens
NHVNRYMAATATTKACNNDN
NHNNGTMAATATTKRYNBDN
SELEX
Yin et al.(2017)
FOXA2_eDBD_HT-SELEX
0.835
0.907
Foxa2
M08121_2.00
Mus musculus
TRTTTACWYWDN
NHWRWGTAAAYA
ChIP-seq
Mathelier et al.(2014)
MA0047.2
0.835
0.907
FOXA2
M07959_2.00
Homo sapiens
NNWRWGYAAAYANNN
NNNTRTTTRCWYWNN
ChIP-seq
Gerstein et al.(2012)
HepG2_FOXA2_HudsonAlpha
0.835
0.907
FOXA2
M09088_2.00
Homo sapiens
NHWRWGTAAACA
TGTTTACWYWDN
Misc
Kulakovskiy et al.(2013)
FOXA2_HUMAN.H11MO.0.A
0.835
0.907
Foxa2
M09104_2.00
Mus musculus
BNHTRTTKACWYW
WRWGTMAAYADNV
Misc
Kulakovskiy et al.(2013)
FOXA2_MOUSE.H11MO.0.A
0.835
0.907
FOXA2
M09542_2.00
Homo sapiens
WVWGTMAACANV
BNTGTTKACWBW
Misc
Heinz et al.(2010)
Liver-Foxa2_GSE25694
0.835
0.907
FOXA2
M10540_2.00
Homo sapiens
WAARYAAAYADKNMV
BKNMHTRTTTRYTTW
Transfac
Matys et al.(2006)
V$HNF3B_01
0.835
0.907
FOXA2
M10541_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$HNF3B_Q6
0.835
0.907
AAA20679
M10575_2.00
Xenopus laevis
WNWGTMAACAWWMW
WKWWTGTTKACWNW
Transfac
Matys et al.(2006)
V$XFD3_01
0.835
0.907
FOXA2
M04816_2.00
Homo sapiens
NWRNRYMAATATTKACWNWN
NWNWGTMAATATTKRYNYWN
SELEX
Yin et al.(2017)
FOXA2_eDBD_Methyl-HT-SELEX
0.835
0.907
FOXA1
M04817_2.00
Homo sapiens
NTRTKTACMYWN
NWRKGTAMAYAN
SELEX
Yin et al.(2017)
FOXA1_eDBD_HT-SELEX
0.820
0.884
FOXA1
M04819_2.00
Homo sapiens
BVYTAWGTAAACAAWN
NWTTGTTTACWTARBV
SELEX
Yin et al.(2017)
FOXA1_FL_HT-SELEX_1
0.820
0.884
FOXA1
M04820_2.00
Homo sapiens
HWRWRYAAATATTKACWYWR
YWRWGTMAATATTTRYWYWD
SELEX
Yin et al.(2017)
FOXA1_FL_HT-SELEX_2
0.820
0.884
FOXA1
M08117_2.00
Homo sapiens
NNNNTRTTTACWYWD
HWRWGTAAAYANNNN
ChIP-seq
Mathelier et al.(2014)
MA0148.3
0.820
0.884
FOXA1
M07960_2.00
Homo sapiens
NNYWRWGYAAACANN
NNTGTTTRCWYWRNN
ChIP-seq
Gerstein et al.(2012)
ECC-1_FOXA1_HudsonAlpha
0.820
0.884
FOXA1
M07961_2.00
Homo sapiens
HWRWGTAAAYA
TRTTTACWYWD
ChIP-seq
Gerstein et al.(2012)
HepG2_FOXA1_HudsonAlpha
0.820
0.884
FOXA1
M07962_2.00
Homo sapiens
NWVWGTAAACA
TGTTTACWBWN
ChIP-seq
Gerstein et al.(2012)
T-47D_FOXA1_HudsonAlpha
0.820
0.884
FOXA1
M08199_2.00
Homo sapiens
BWRDGTAAACANN
NNTGTTTACHYWV
ChIP-seq
Contrino et al.(2012)
Mv69
0.820
0.884
FOXA1
M08028_2.00
Homo sapiens
WRWRYAAAYA
TRTTTRYWYW
ChIP-seq
Chen et al.(2011)
GSE15244_FoxA1
0.820
0.884
FOXA1
M09090_2.00
Homo sapiens
VHWRWGTAAACA
TGTTTACWYWDB
Misc
Kulakovskiy et al.(2013)
FOXA1_HUMAN.H11MO.0.A
0.820
0.884
Foxa1
M09103_2.00
Mus musculus
TRTTKACWYW
WRWGTMAAYA
Misc
Kulakovskiy et al.(2013)
FOXA1_MOUSE.H11MO.0.A
0.820
0.884
FOXA1
M09544_2.00
Homo sapiens
WGCCAARRYAAAYANN
NNTRTTTRYYTTGGCW
Misc
Heinz et al.(2010)
LNCAP-FOXA1_GSE27824_2
0.820
0.884
FOXA1
M09543_2.00
Homo sapiens
WRWGTAAACA
TGTTTACWYW
Misc
Heinz et al.(2010)
LNCAP-FOXA1_GSE27824_1
0.820
0.884
FOXA1
M09545_2.00
Homo sapiens
WRWGTAAAYA
TRTTTACWYW
Misc
Heinz et al.(2010)
MCF7-FOXA1_GSE26831
0.820
0.884
FOXA1
M10542_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$FOXA1_02
0.820
0.884
FOXA1
M10543_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$FOXA1_03
0.820
0.884
FOXA1
M10544_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$HNF3A_01
0.820
0.884
FOXA1
M10545_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$HNF3ALPHA_Q6
0.820
0.884
FOXA1
M10546_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$HNF3A_Q6
0.820
0.884
FOXA1
M04818_2.00
Homo sapiens
NWRDGYMAAYAW
WTRTTKRCHYWN
SELEX
Yin et al.(2017)
FOXA1_eDBD_Methyl-HT-SELEX
0.820
0.884
FOXA1
M04821_2.00
Homo sapiens
BVYTAWGTAAACAAWV
BWTTGTTTACWTARBV
SELEX
Yin et al.(2017)
FOXA1_FL_Methyl-HT-SELEX_1
0.820
0.884
FOXA1
M04822_2.00
Homo sapiens
YTRWRYAAATATTTACWYAR
YTRWGTAAATATTTRYWYAR
SELEX
Yin et al.(2017)
FOXA1_FL_Methyl-HT-SELEX_2
0.820
0.884
Q2L6N7_PELSI
M01990_2.00
Trionyx sinensis
KTRTTTACA
TGTAAAYAM
PBM
Weirauch et al.(2014)
pTH5334
0.808
0.826
FOXA3
M04831_2.00
Homo sapiens
BVYTAWGTAAACAAAN
NTTTGTTTACWTARBV
SELEX
Yin et al.(2017)
FOXA3_FL_HT-SELEX_1
0.796
0.849
FOXA3
M04832_2.00
Homo sapiens
HWRWGYAAATATTKACWYWD
HWRWGTMAATATTTRCWYWD
SELEX
Yin et al.(2017)
FOXA3_FL_HT-SELEX_2
0.796
0.849
FOXA3
M09096_2.00
Homo sapiens
HWRWGTMAAYADN
NHTRTTKACWYWD
Misc
Kulakovskiy et al.(2013)
FOXA3_HUMAN.H11MO.0.B
0.796
0.849
Foxa3
M09106_2.00
Mus musculus
HWRWGTMAAYADN
NHTRTTKACWYWD
Misc
Kulakovskiy et al.(2013)
FOXA3_MOUSE.H11MO.0.A
0.796
0.849
FOXA3
M10557_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$HNF3G_Q4
0.796
0.849
FOXA3
M04833_2.00
Homo sapiens
CVYTAWGTAAACAAWB
VWTTGTTTACWTARBG
SELEX
Yin et al.(2017)
FOXA3_FL_Methyl-HT-SELEX_1
0.796
0.849
FOXA3
M04834_2.00
Homo sapiens
HWRWGYAAATATTKACWYWD
HWRWGTMAATATTTRCWYWD
SELEX
Yin et al.(2017)
FOXA3_FL_Methyl-HT-SELEX_2
0.796
0.849
pha-4
M08123_2.00
Caenorhabditis elegans
WRWGYAAAYA
TRTTTRCWYW
ChIP-seq
Mathelier et al.(2014)
MA0546.1
0.751
0.814
pha-4
M08201_2.00
Caenorhabditis elegans
GTAAACAR
YTGTTTAC
ChIP-seq
Contrino et al.(2012)
Mw164
0.751
0.814
pha-4
M09548_2.00
Caenorhabditis elegans
RYAMAYAN
NTRTKTRY
Misc
Heinz et al.(2010)
cElegans-Embryos-PHA4_modEncode
0.751
0.814
Foxb1
M01983_2.00
Mus musculus
TRTTKAYWYW
WRWRTMAAYA
PBM
Weirauch et al.(2014)
pTH2808
0.720
0.756
FOXB1
M03028_2.00
Homo sapiens
GAATGACACRGCKV
BMGCYGTGTCATTC
SELEX
Jolma et al.(2013)
FOXB1_1
0.720
0.756
FOXB1
M03029_2.00
Homo sapiens
WRWGTMAATATTKACWYW
WRWGTMAATATTKACWYW
SELEX
Jolma et al.(2013)
FOXB1_2
0.720
0.756
FOXB1
M03030_2.00
Homo sapiens
WTRTTKACWTW
WAWGTMAAYAW
SELEX
Jolma et al.(2013)
FOXB1_3
0.720
0.756
FOXB1
M03031_2.00
Homo sapiens
NTRTTTACW
WGTAAAYAN
SELEX
Jolma et al.(2013)
FOXB1_4
0.720
0.756
FOXB1
M04837_2.00
Homo sapiens
NWRDGYMAATATTKRCWYWD
HWRWGYMAATATTKRCHYWN
SELEX
Yin et al.(2017)
FOXB1_eDBD_HT-SELEX
0.720
0.756
FOXB1
M04838_2.00
Homo sapiens
NWRNGYMAATATTKRCDYWD
HWRHGYMAATATTKRCNYWN
SELEX
Yin et al.(2017)
FOXB1_eDBD_Methyl-HT-SELEX
0.720
0.756
fd96Ca
M03743_2.00
Drosophila melanogaster
WRWGYMAATATTKRCWYW
WRWGYMAATATTKRCWYW
SELEX
Nitta et al.(2015)
fd96Ca_1
0.701
0.674
fd64A
M06197_2.00
Drosophila melanogaster
KVWAAACA
TGTTTWBM
B1H
Zhu et al.(2011)
fd64A_SANGER_5_FBgn0004895
0.671
0.640
For this family, TFs with SR scores >
0.664
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
FBpp0240140
Forkhead
179
268
KPPYSYISLITMAIQNNPTRMLTLSEIYQFIMDLFPFYRQNQQRWQNSIRHSLSFNDCFVKIPRTPDKPGKGSFWTLHPDSGNMFENGCY
Links
Other
Forkhead
family TFs
Other
Drosophila willistoni
TFs
566 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy