NEMVEDRAFT_v1g39632 (Nematostella vectensis)
Forkhead

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00250 (Forkhead) IPR001766 NEMVEDRAFT_v1g39632 T188194_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
FOXC1
M00257_2.00 		Homo sapiens
NNNVHHAAYA
TRTTDDBNNN		 PBM
Barrera et al.(2016)
FOXC1_REF 		0.695 0.640
Foxc1
M01982_2.00 		Mus musculus
HNNRHMAAYA
TRTTKDYNND		 PBM
Weirauch et al.(2014)
pTH2673 		0.695 0.640
FOXC1
M03013_2.00 		Homo sapiens
AWRTAAAYAAAYA
TRTTTRTTTAYWT		 SELEX
Jolma et al.(2013)
FOXC1_1 		0.695 0.640
FOXC1
M03014_2.00 		Homo sapiens
NRWMAATATTKWYN
NRWMAATATTKWYN		 SELEX
Jolma et al.(2013)
FOXC1_2 		0.695 0.640
FOXC1
M03015_2.00 		Homo sapiens
WRWRTMAAYAW
WTRTTKAYWYW		 SELEX
Jolma et al.(2013)
FOXC1_3 		0.695 0.640
Foxc1
M03059_2.00 		Mus musculus
RTAAAYAAACA
TGTTTRTTTAY		 SELEX
Jolma et al.(2013)
Foxc1_1 		0.695 0.640
Foxc1
M03060_2.00 		Mus musculus
RTAAACA
TGTTTAY		 SELEX
Jolma et al.(2013)
Foxc1_2 		0.695 0.640
FOXC1
M09083_2.00 		Homo sapiens
SBWAWRTAAACADHN
NDHTGTTTAYWTWVS		 Misc
Kulakovskiy et al.(2013)
FOXC1_HUMAN.H11MO.0.C 		0.695 0.640
Foxc1
M09111_2.00 		Mus musculus
SBWAWRTAAACADHN
NDHTGTTTAYWTWVS		 Misc
Kulakovskiy et al.(2013)
FOXC1_MOUSE.H11MO.0.C 		0.695 0.640
FOXC1
M10525_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$FOXC1_Q4 		0.695 0.640
FOXC1
M10526_2.00 		Homo sapiens
TSTTTATTTACDBNVN
NBNVHGTAAATAAASA		 Transfac
Matys et al.(2006)
V$FREAC3_01 		0.695 0.640
FOXC1
M00253_2.00 		Homo sapiens
NNHATAAWHAN
NTDWTTATDNN		 PBM
Barrera et al.(2016)
FOXC1_F112S 		0.695 0.628
FOXC1
M00255_2.00 		Homo sapiens
NRTATATWHNNN
NNNDWATATAYN		 PBM
Barrera et al.(2016)
FOXC1_L130F 		0.695 0.628
FOXC1
M00256_2.00 		Homo sapiens
NNNNWWTYAMAWN
NWTKTRAWWNNNN		 PBM
Barrera et al.(2016)
FOXC1_P79L 		0.695 0.628
FOXC1
M00258_2.00 		Homo sapiens
NNNAMAAYANN
NNTRTTKTNNN		 PBM
Barrera et al.(2016)
FOXC1_S131L 		0.695 0.628
FOXC1
M00259_2.00 		Homo sapiens
RTAAACAW
WTGTTTAY		 PBM
Barrera et al.(2016)
FOXC1_S82T 		0.695 0.628
fd64A
M06197_2.00 		Drosophila melanogaster
KVWAAACA
TGTTTWBM		 B1H
Zhu et al.(2011)
fd64A_SANGER_5_FBgn0004895 		0.679 0.616
FOXL1
M03034_2.00 		Homo sapiens
RTAAACA
TGTTTAY		 SELEX
Jolma et al.(2013)
FOXL1_1 		0.676 0.628
FOXL1
M03035_2.00 		Homo sapiens
NRTAAAYAAAYAN
NTRTTTRTTTAYN		 SELEX
Jolma et al.(2013)
FOXL1_2 		0.676 0.628
FOXL1
M10558_2.00 		Homo sapiens
DHNVHATAAAYAHNNN
NNNDTRTTTATDBNDH		 Transfac
Matys et al.(2006)
V$FREAC7_01 		0.676 0.628
Foxl1
M00164_2.00 		Mus musculus
NNNRTMAAYA
TRTTKAYNNN		 PBM
Badis et al.(2009)
Foxl1_2809 		0.676 0.616
FOXC1
M00254_2.00 		Homo sapiens
RRTAAACANN
NNTGTTTAYY		 PBM
Barrera et al.(2016)
FOXC1_I126M 		0.671 0.628
FOXE1
M04845_2.00 		Homo sapiens
BVYTAWRYAAACADN
NHTGTTTRYWTARBV		 SELEX
Yin et al.(2017)
FOXE1_eDBD_HT-SELEX 		0.670 0.628
FOXE1
M04846_2.00 		Homo sapiens
BVYTAARYAAACAWH
DWTGTTTRYTTARBV		 SELEX
Yin et al.(2017)
FOXE1_eDBD_Methyl-HT-SELEX 		0.670 0.628
let-381
M00664_2.00 		Caenorhabditis elegans
RTAAACAW
WTGTTTAY		 PBM
Narasimhan et al.(2015)
pTH9057 		0.668 0.523
croc
M03744_2.00 		Drosophila melanogaster
WRYGTMAACAH
DTGTTKACRYW		 SELEX
Nitta et al.(2015)
croc_1 		0.668 0.628
croc
M10571_2.00 		Drosophila melanogaster
HWNARTAAATAKNNNV
BNNNMTATTTAYYNWD		 Transfac
Matys et al.(2006)
I$CROC_01 		0.668 0.628
For this family, TFs with SR scores > 0.664 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
EDO45104 Forkhead 1 92

Links

Other Forkhead family TFs
Other Nematostella vectensis TFs

385 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action