CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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TPHA_0F01390
(
Tetrapisispora phaffii
)
Forkhead
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00250 (Forkhead)
IPR001766
TPHA_0F01390
T188693_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
FKH2
M00045_2.00
Saccharomyces cerevisiae
GTAAACAH
DTGTTTAC
PBM
Badis et al.(2008)
FKH2_4517
0.784
0.849
FKH2
M01542_2.00
Saccharomyces cerevisiae
NNVWMAAYAN
NTRTTKWBNN
PBM
Zhu et al.(2009)
Fkh2
0.784
0.849
FKH2
M07474_2.00
Saccharomyces cerevisiae
GTAAACA
TGTTTAC
PBM, CSA and or DIP-chip
Mathelier et al.(2014)
MA0297.1
0.784
0.849
FKH2
M08556_2.00
Saccharomyces cerevisiae
NNNNDNGTAAACAAANNNDV
BHNNNTTTGTTTACNHNNNN
Misc
DeBoer et al.(2011)
YNL068C_830
0.784
0.849
FKH1
M01541_2.00
Saccharomyces cerevisiae
NNRTMAAYAN
NTRTTKAYNN
PBM
Zhu et al.(2009)
Fkh1
0.701
0.674
FKH1
M08555_2.00
Saccharomyces cerevisiae
NNGTAAACADVN
NBHTGTTTACNN
Misc
DeBoer et al.(2011)
YIL131C_2002
0.701
0.674
For this family, TFs with SR scores >
0.664
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
CCE63623
Forkhead
268
357
KPPHSYATMITQAILSTEEGIISLSDIYRFISSNYSYYRFAKTGWQNSIRHNLSLNKAFDKVPRKPNEPGKGMKWRISEDYRNEFLNKWN
Links
Other
Forkhead
family TFs
Other
Tetrapisispora phaffii
TFs
133 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
VDBG_05524
Verticillium albo atrum
VDBG_05524
N
CFIO01_00410
Colletotrichum fioriniae
CFIO01_00410
N
CH063_03184
Colletotrichum higginsianum
CH063_03184
N
CORT_0A09950
Candida orthopsilosis
CORT_0A09950
N
FFUJ_10884
Fusarium fujikuroi
FFUJ_10884
N
NEUTE1DRAFT_149656
Neurospora tetrasperma
NEUTE1DRAFT_149656
N
PTRG_09422
Pyrenophora triticirepentis
PTRG_09422
N
VDAG_02347
Verticillium dahliae
VDAG_02347
N
VDAG_10120
Verticillium dahliae
VDAG_10120
N
VDBG_05524
Verticillium alfalfae
VDBG_05524
N