CIS-BP Database: Catalog of Inferred Sequence Binding Preferences

TF Information

TriadG29433 *(Trichoplax adhaerens)* Forkhead
Pfam ID	Interpro ID	Gene ID	CIS-BP ID	Sequence source	Animal TF db
PF00250 (Forkhead)	IPR001766	TriadG29433	T188706_2.00	Ensembl (2018-Dec-8)	Link out
Directly determined binding motifs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
No direct experiments
Motifs from related TFs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
slp2 M03738_2.00	Drosophila melanogaster	NNTRTTTACAACAHN	NDTGTTGTAAAYANN	SELEX Nitta et al.(2015) slp2_1	0.859	0.872
slp2 M06196_2.00	Drosophila melanogaster	RTAAACAV	BTGTTTAY	B1H Zhu et al.(2011) slp2_SANGER_5_FBgn0004567	0.859	0.872
FOXG1 M01978_2.00	Homo sapiens	RTAAACAH	DTGTTTAY	PBM Weirauch et al.(2014) pTH5501	0.839	0.895
Foxg1 M00791_2.00	Mus musculus	NNNNMHAYAN	NTRTDKNNNN	PBM Weirauch et al.(2013) pTH2846	0.839	0.895
FOXG1 M03032_2.00	Homo sapiens	RTAAACAATDGTAAACA	TGTTTACHATTGTTTAY	SELEX Jolma et al.(2013) FOXG1_1	0.839	0.895
FOXG1 M03033_2.00	Homo sapiens	RCGGACACAATR	YATTGTGTCCGY	SELEX Jolma et al.(2013) FOXG1_2	0.839	0.895
Foxg1 M03052_2.00	Mus musculus	ATAAACAAVTGTMAACA	TGTTKACABTTGTTTAT	SELEX Jolma et al.(2013) Foxg1_1	0.839	0.895
Foxg1 M03053_2.00	Mus musculus	MHGGACACAATC	GATTGTGTCCDK	SELEX Jolma et al.(2013) Foxg1_2	0.839	0.895
Foxg1 M03054_2.00	Mus musculus	GTAAACA	TGTTTAC	SELEX Jolma et al.(2013) Foxg1_3	0.839	0.895
FOXG1 M04839_2.00	Homo sapiens	NACRYMMACAH	DTGTKKRYGTN	SELEX Yin et al.(2017) FOXG1_eDBD_HT-SELEX	0.839	0.895
FOXG1 M04840_2.00	Homo sapiens	HRCGYMAACAH	DTGTTKRCGYD	SELEX Yin et al.(2017) FOXG1_eDBD_Methyl-HT-SELEX	0.839	0.895
foxg1a M01985_2.00	Oryzias latipes	RTAAACAH	DTGTTTAY	PBM Weirauch et al.(2014) pTH6729	0.834	0.849
CBG14280 M01974_2.00	Caenorhabditis briggsae	RTAAACAN	NTGTTTAY	PBM Weirauch et al.(2014) pTH6734	0.827	0.779
slp1 M01986_2.00	Drosophila melanogaster	NRTAAACANN	NNTGTTTAYN	PBM Weirauch et al.(2014) pTH6549	0.824	0.744
slp1 M03736_2.00	Drosophila melanogaster	WDYRTAAACAWW	WWTGTTTAYRHW	SELEX Nitta et al.(2015) slp1_1	0.824	0.744
slp1 M03737_2.00	Drosophila melanogaster	RTRTAAACAAAYADH	DHTRTTTGTTTAYAY	SELEX Nitta et al.(2015) slp1_2	0.824	0.744
slp1 M06474_2.00	Drosophila melanogaster	WRBVWAAACAH	DTGTTTWBVYW	B1H Mathelier et al.(2014) MA0458.1	0.824	0.744
slp1 M06195_2.00	Drosophila melanogaster	WRBVWAAACAH	DTGTTTWBVYW	B1H Zhu et al.(2011) slp1_NAR_FBgn0003430	0.824	0.744
slp1 M09669_2.00	Drosophila melanogaster	ATGTMAACAMAVV	BBTKTGTTKACAT	Misc Kulakovskiy et al.(2009) slp1	0.824	0.744
FOXI1 M03026_2.00	Homo sapiens	GTAAACA	TGTTTAC	SELEX Jolma et al.(2013) FOXI1_1	0.730	0.663
FOXI1 M03027_2.00	Homo sapiens	RTGTKTACGGTAAACAA	TTGTTTACCGTAMACAY	SELEX Jolma et al.(2013) FOXI1_2	0.730	0.663
FOXI1 M04827_2.00	Homo sapiens	NNNNNRTMAACAN	NTGTTKAYNNNNN	SELEX Yin et al.(2017) FOXI1_eDBD_HT-SELEX	0.730	0.663
FOXI1 M04829_2.00	Homo sapiens	AAYGTAAACAMW	WKTGTTTACRTT	SELEX Yin et al.(2017) FOXI1_FL_HT-SELEX	0.730	0.663
FOXI1 M09095_2.00	Homo sapiens	RRCCAATCAVAD	HTBTGATTGGYY	Misc Kulakovskiy et al.(2013) FOXI1_HUMAN.H11MO.0.B	0.730	0.663
FOXI1 M10556_2.00	Homo sapiens	HAWAYAAAYAHVH	DBDTRTTTRTWTD	Transfac Matys et al.(2006) V$HFH3_01	0.730	0.663
FOXI1 M04828_2.00	Homo sapiens	NWWVHRTAAACAH	DTGTTTAYDBWWN	SELEX Yin et al.(2017) FOXI1_eDBD_Methyl-HT-SELEX	0.730	0.663
FOXI1 M04830_2.00	Homo sapiens	AAYRTAAACAAW	WTTGTTTAYRTT	SELEX Yin et al.(2017) FOXI1_FL_Methyl-HT-SELEX	0.730	0.663
Foxi1 M09109_2.00	Mus musculus	RRCCAATCAVAD	HTBTGATTGGYY	Misc Kulakovskiy et al.(2013) FOXI1_MOUSE.H11MO.0.B	0.730	0.651
FOXE1 M04845_2.00	Homo sapiens	BVYTAWRYAAACADN	NHTGTTTRYWTARBV	SELEX Yin et al.(2017) FOXE1_eDBD_HT-SELEX	0.713	0.663
FOXE1 M04846_2.00	Homo sapiens	BVYTAARYAAACAWH	DWTGTTTRYTTARBV	SELEX Yin et al.(2017) FOXE1_eDBD_Methyl-HT-SELEX	0.713	0.663
Foxl1 M00164_2.00	Mus musculus	NNNRTMAAYA	TRTTKAYNNN	PBM Badis et al.(2009) Foxl1_2809	0.709	0.686
FOXL1 M03034_2.00	Homo sapiens	RTAAACA	TGTTTAY	SELEX Jolma et al.(2013) FOXL1_1	0.709	0.686
FOXL1 M03035_2.00	Homo sapiens	NRTAAAYAAAYAN	NTRTTTRTTTAYN	SELEX Jolma et al.(2013) FOXL1_2	0.709	0.686
FOXL1 M10558_2.00	Homo sapiens	DHNVHATAAAYAHNNN	NNNDTRTTTATDBNDH	Transfac Matys et al.(2006) V$FREAC7_01	0.709	0.686
Foxc2 M00796_2.00	Mus musculus	HNNRHMAAYA	TRTTKDYNND	PBM Weirauch et al.(2013) pTH3796	0.702	0.733
FOXC2 M03036_2.00	Homo sapiens	NRTMAATATTDWYN	NRWHAATATTKAYN	SELEX Jolma et al.(2013) FOXC2_1	0.702	0.733
FOXC2 M03037_2.00	Homo sapiens	RTAAAYAAACA	TGTTTRTTTAY	SELEX Jolma et al.(2013) FOXC2_2	0.702	0.733
FOXC2 M03038_2.00	Homo sapiens	WAHRTMAAYAWW	WWTRTTKAYDTW	SELEX Jolma et al.(2013) FOXC2_3	0.702	0.733
FOXC2 M04841_2.00	Homo sapiens	NHVNRYMAACAH	DTGTTKRYNBDN	SELEX Yin et al.(2017) FOXC2_eDBD_HT-SELEX_1	0.702	0.733
FOXC2 M04842_2.00	Homo sapiens	RHAMAYAAACAH	DTGTTTRTKTDY	SELEX Yin et al.(2017) FOXC2_eDBD_HT-SELEX_2	0.702	0.733
FOXC2 M10559_2.00	Homo sapiens	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$FKHL14_Q2	0.702	0.733
FOXC2 M04843_2.00	Homo sapiens	NHNNRYMAACAN	NTGTTKRYNNDN	SELEX Yin et al.(2017) FOXC2_eDBD_Methyl-HT-SELEX_1	0.702	0.733
FOXC2 M04844_2.00	Homo sapiens	VHMMAYAAACAN	NTGTTTRTKKDB	SELEX Yin et al.(2017) FOXC2_eDBD_Methyl-HT-SELEX_2	0.702	0.733
foxe3 M01228_2.00	Xenopus tropicalis	WNNVHHMAYW	WRTKDDBNNW	PBM Lambert et al.(2019) pTH9824	0.698	0.698
FOXL2 M04847_2.00	Homo sapiens	NVBGHMAACAH	DTGTTKDCVBN	SELEX Yin et al.(2017) FOXL2_FL_HT-SELEX	0.693	0.709
Foxl2 M09112_2.00	Mus musculus	DWDWRTAAACA	TGTTTAYWHWH	Misc Kulakovskiy et al.(2013) FOXL2_MOUSE.H11MO.0.C	0.693	0.709
FOXL2 M10560_2.00	Homo sapiens	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$FOXL2_Q2	0.693	0.709
FOXL2 M10561_2.00	Homo sapiens	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$FOXL2_Q5	0.693	0.709
FOXL2 M04848_2.00	Homo sapiens	HVCGWMAACAH	DTGTTKWCGBD	SELEX Yin et al.(2017) FOXL2_FL_Methyl-HT-SELEX	0.693	0.709
FOXC1 M00257_2.00	Homo sapiens	NNNVHHAAYA	TRTTDDBNNN	PBM Barrera et al.(2016) FOXC1_REF	0.678	0.709
Foxc1 M01982_2.00	Mus musculus	HNNRHMAAYA	TRTTKDYNND	PBM Weirauch et al.(2014) pTH2673	0.678	0.709
FOXC1 M03013_2.00	Homo sapiens	AWRTAAAYAAAYA	TRTTTRTTTAYWT	SELEX Jolma et al.(2013) FOXC1_1	0.678	0.709
FOXC1 M03014_2.00	Homo sapiens	NRWMAATATTKWYN	NRWMAATATTKWYN	SELEX Jolma et al.(2013) FOXC1_2	0.678	0.709
FOXC1 M03015_2.00	Homo sapiens	WRWRTMAAYAW	WTRTTKAYWYW	SELEX Jolma et al.(2013) FOXC1_3	0.678	0.709
Foxc1 M03059_2.00	Mus musculus	RTAAAYAAACA	TGTTTRTTTAY	SELEX Jolma et al.(2013) Foxc1_1	0.678	0.709
Foxc1 M03060_2.00	Mus musculus	RTAAACA	TGTTTAY	SELEX Jolma et al.(2013) Foxc1_2	0.678	0.709
FOXC1 M09083_2.00	Homo sapiens	SBWAWRTAAACADHN	NDHTGTTTAYWTWVS	Misc Kulakovskiy et al.(2013) FOXC1_HUMAN.H11MO.0.C	0.678	0.709
Foxc1 M09111_2.00	Mus musculus	SBWAWRTAAACADHN	NDHTGTTTAYWTWVS	Misc Kulakovskiy et al.(2013) FOXC1_MOUSE.H11MO.0.C	0.678	0.709
FOXC1 M10525_2.00	Homo sapiens	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$FOXC1_Q4	0.678	0.709
FOXC1 M10526_2.00	Homo sapiens	TSTTTATTTACDBNVN	NBNVHGTAAATAAASA	Transfac Matys et al.(2006) V$FREAC3_01	0.678	0.709
FOXC1 M00253_2.00	Homo sapiens	NNHATAAWHAN	NTDWTTATDNN	PBM Barrera et al.(2016) FOXC1_F112S	0.678	0.698
FOXC1 M00255_2.00	Homo sapiens	NRTATATWHNNN	NNNDWATATAYN	PBM Barrera et al.(2016) FOXC1_L130F	0.678	0.698
FOXC1 M00256_2.00	Homo sapiens	NNNNWWTYAMAWN	NWTKTRAWWNNNN	PBM Barrera et al.(2016) FOXC1_P79L	0.678	0.698
FOXC1 M00258_2.00	Homo sapiens	NNNAMAAYANN	NNTRTTKTNNN	PBM Barrera et al.(2016) FOXC1_S131L	0.678	0.698
FOXC1 M00259_2.00	Homo sapiens	RTAAACAW	WTGTTTAY	PBM Barrera et al.(2016) FOXC1_S82T	0.678	0.698
fd64A M06197_2.00	Drosophila melanogaster	KVWAAACA	TGTTTWBM	B1H Zhu et al.(2011) fd64A_SANGER_5_FBgn0004895	0.673	0.674
For this family, TFs with SR scores > 0.664* will likely have a similar motif*

DNA Binding Domains

Protein ID	Domain	From	To	Sequence
TriadP29433	Forkhead	60	149	KPPYSYNALIMMAIRNSSEKRLTLNGIYEFIMKNFPFYRENKQGWQNSIRHNLSLNKCFIKVPRSYDDPGKGNYWMLDPSSEDMYIGGTS

Links
Other Forkhead family TFs
Other *Trichoplax adhaerens* TFs

871 Related TFs

Name	Species	Gene ID	Motif Evidence	SR Score	Action

TriadG29433 (Trichoplax adhaerens) Forkhead

TF Information

Directly determined binding motifs

Motifs from related TFs

DNA Binding Domains

Links

871 Related TFs

TriadG29433 **(Trichoplax adhaerens)
Forkhead**