GPLIN_000360700 (Globodera pallida)
Forkhead

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00250 (Forkhead) IPR001766 GPLIN_000360700 T190548_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
FOXP1
M00836_2.00 		Homo sapiens
NRTMAACANN
NNTGTTKAYN		 PBM
Gabut et al.(2011)
pEX0123 		0.780 0.817
FOXP1
M00837_2.00 		Homo sapiens
DGTAAACAA
TTGTTTACH		 PBM
Gabut et al.(2011)
pEX0124 		0.780 0.817
FOXP1
M01976_2.00 		Homo sapiens
RTAAACAA
TTGTTTAY		 PBM
Weirauch et al.(2014)
pTH5656 		0.780 0.817
Foxp1
M00793_2.00 		Mus musculus
NRTMAAYAN
NTRTTKAYN		 PBM
Weirauch et al.(2013)
pTH3855 		0.780 0.817
FOXP1
M04811_2.00 		Homo sapiens
NTGTTTRYNRTNNNNNNBNAYRVWMAACAN
NTGTTKWBYRTNVNNNNNNAYNRYAAACAN		 SELEX
Yin et al.(2017)
FOXP1_eDBD_HT-SELEX 		0.780 0.817
FOXP1
M08115_2.00 		Homo sapiens
NDGTAAACAVNN
NNBTGTTTACHN		 ChIP-seq
Mathelier et al.(2014)
MA0481.2 		0.780 0.817
FOXP1
M09086_2.00 		Homo sapiens
RKAAACAVM
KBTGTTTMY		 Misc
Kulakovskiy et al.(2013)
FOXP1_HUMAN.H11MO.0.A 		0.780 0.817
FOXP1
M09541_2.00 		Homo sapiens
NDGTAAACAVNN
NNBTGTTTACHN		 Misc
Heinz et al.(2010)
H9-FOXP1_GSE31006 		0.780 0.817
FOXP1
M10536_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$FOXP1_01 		0.780 0.817
FOXP1
M04812_2.00 		Homo sapiens
NTGTTTRYBRTNNNNNNBNAYRVWMAACAH
DTGTTKWBYRTNVNNNNNNAYVRYAAACAN		 SELEX
Yin et al.(2017)
FOXP1_eDBD_Methyl-HT-SELEX 		0.780 0.817
Foxp2
M00792_2.00 		Mus musculus
RTAAACAD
HTGTTTAY		 PBM
Weirauch et al.(2013)
pTH1288 		0.742 0.805
FOXP2
M05866_2.00 		Homo sapiens
RTAAAYAWNN
NNWTRTTTAY		 SMiLE-seq
Isakova et al.(2017)
FOXP2 		0.742 0.805
FOXP2
M08116_2.00 		Homo sapiens
NDGTAAACAVN
NBTGTTTACHN		 ChIP-seq
Mathelier et al.(2014)
MA0593.1 		0.742 0.805
FOXP2
M09089_2.00 		Homo sapiens
DGTAAACAV
BTGTTTACH		 Misc
Kulakovskiy et al.(2013)
FOXP2_HUMAN.H11MO.0.C 		0.742 0.805
Foxp2
M09101_2.00 		Mus musculus
NGTAAACAN
NTGTTTACN		 Misc
Kulakovskiy et al.(2013)
FOXP2_MOUSE.H11MO.0.A 		0.742 0.805
FoxP
M03753_2.00 		Drosophila melanogaster
AAACAACAACAA
TTGTTGTTGTTT		 SELEX
Nitta et al.(2015)
CG16899_1 		0.706 0.720
FoxP
M06201_2.00 		Drosophila melanogaster
VRTAAACAA
TTGTTTAYB		 B1H
Zhu et al.(2011)
CG16899_SANGER_5_FBgn0037735 		0.706 0.720
FoxP
M06202_2.00 		Drosophila melanogaster
VNNVBBAAAAAAAD
HTTTTTTTVVBNNB		 B1H
Zhu et al.(2011)
CG2052_SANGER_2.5_FBgn0039905 		0.706 0.720
FoxP
M06203_2.00 		Drosophila melanogaster
NNNNNRAAAAAAWNN
NNWTTTTTTYNNNNN		 B1H
Zhu et al.(2011)
CG2052_SOLEXA_2.5_FBgn0039905 		0.706 0.720
For this family, TFs with SR scores > 0.664 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
GPLIN_000360700 Forkhead 791 876

Links

Other Forkhead family TFs
Other Globodera pallida TFs

345 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
TRIVIDRAFT_28900 Trichoderma virens TRIVIDRAFT_28900 N
MGU_09688 Metarhizium guizhouense MGU_09688 N
NechaG48150 Fusarium solani NechaG48150 N
PMAA_094680 Talaromyces marneffei PMAA_094680 N
PVAR5_4693 Byssochlamys spectabilis PVAR5_4693 N
S40285_07120 Stachybotrys chlorohalonata S40285_07120 N
S40288_03847 Stachybotrys chartarum S40288_03847 N
TRIATDRAFT_230088 Trichoderma atroviride TRIATDRAFT_230088 N
TRIREDRAFT_27600 Trichoderma reesei TRIREDRAFT_27600 N
TRIVIDRAFT_124941 Trichoderma virens TRIVIDRAFT_124941 N
MGU_07705 Metarhizium guizhouense MGU_07705 N
TSTA_046470 Talaromyces stipitatus TSTA_046470 N
VDBG_09590 Verticillium alfalfae VDBG_09590 N
VHEMI01686 Torrubiella hemipterigena VHEMI01686 N
W97_06772 Coniosporium apollinis W97_06772 N
X797_002538 Metarhizium robertsii X797_002538 N
X797_007108 Metarhizium robertsii X797_007108 N
e_gw1.27.52.1 Nectria haematococca e_gw1.27.52.1 N
estExt_Genewise1Plus.C_100437 Cochliobolus heterostrophus C5 estExt_Genewise1Plus.C_100437 N
PMAA_094680 Penicillium marneffei PMAA_094680 N
FOXG_02769 Fusarium oxysporum FOXG_02769 N
ANIA_07867 Aspergillus nidulans CADANIAG00003882 N
ATEG_08370 Aspergillus terreus CADATEAG00005065 N
NFIA_056020 Neosartorya fischeri CADNFIAG00004637 N
CCM_07587 Cordyceps militaris CCM_07587 N
Cob_11269 Colletotrichum orbiculare Cob_11269 N
COCC4DRAFT_62224 Bipolaris maydis COCC4DRAFT_62224 N
COCVIDRAFT_42469 Bipolaris victoriae COCVIDRAFT_42469 N
FFUJ_06596 Fusarium fujikuroi FFUJ_06596 N
FGRRES_03919 Fusarium graminearum FGRRES_03919 N
AUEXF2481DRAFT_422292 Aureobasidium subglaciale AUEXF2481DRAFT_422292 N
FPSE_05357 Fusarium pseudograminearum FPSE_05357 N
H072_6817 Dactylellina haptotyla H072_6817 N
MAC_06346 Metarhizium acridum MAC_06346 N
MAJ_05947 Metarhizium majus MAJ_05947 N
MAJ_07613 Metarhizium majus MAJ_07613 N
MANI_020045 Metarhizium anisopliae MANI_020045 N
MAPG_09377 Magnaporthe poae MAPG_09377 N
MBR_00971 Metarhizium brunneum MBR_00971 N
MGG_07845 Magnaporthe oryzae MGG_07845 N