CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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scaffold33-EXSNAP2012.27
(
Pristionchus exspectatus
)
Forkhead
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00250 (Forkhead)
IPR001766
scaffold33-EXSNAP2012.27
T191011_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
CBG14280
M01974_2.00
Caenorhabditis briggsae
RTAAACAN
NTGTTTAY
PBM
Weirauch et al.(2014)
pTH6734
0.824
0.837
slp2
M03738_2.00
Drosophila melanogaster
NNTRTTTACAACAHN
NDTGTTGTAAAYANN
SELEX
Nitta et al.(2015)
slp2_1
0.820
0.802
slp2
M06196_2.00
Drosophila melanogaster
RTAAACAV
BTGTTTAY
B1H
Zhu et al.(2011)
slp2_SANGER_5_FBgn0004567
0.820
0.802
FOXG1
M01978_2.00
Homo sapiens
RTAAACAH
DTGTTTAY
PBM
Weirauch et al.(2014)
pTH5501
0.804
0.779
Foxg1
M00791_2.00
Mus musculus
NNNNMHAYAN
NTRTDKNNNN
PBM
Weirauch et al.(2013)
pTH2846
0.804
0.779
FOXG1
M03032_2.00
Homo sapiens
RTAAACAATDGTAAACA
TGTTTACHATTGTTTAY
SELEX
Jolma et al.(2013)
FOXG1_1
0.804
0.779
FOXG1
M03033_2.00
Homo sapiens
RCGGACACAATR
YATTGTGTCCGY
SELEX
Jolma et al.(2013)
FOXG1_2
0.804
0.779
Foxg1
M03052_2.00
Mus musculus
ATAAACAAVTGTMAACA
TGTTKACABTTGTTTAT
SELEX
Jolma et al.(2013)
Foxg1_1
0.804
0.779
Foxg1
M03053_2.00
Mus musculus
MHGGACACAATC
GATTGTGTCCDK
SELEX
Jolma et al.(2013)
Foxg1_2
0.804
0.779
Foxg1
M03054_2.00
Mus musculus
GTAAACA
TGTTTAC
SELEX
Jolma et al.(2013)
Foxg1_3
0.804
0.779
FOXG1
M04839_2.00
Homo sapiens
NACRYMMACAH
DTGTKKRYGTN
SELEX
Yin et al.(2017)
FOXG1_eDBD_HT-SELEX
0.804
0.779
FOXG1
M04840_2.00
Homo sapiens
HRCGYMAACAH
DTGTTKRCGYD
SELEX
Yin et al.(2017)
FOXG1_eDBD_Methyl-HT-SELEX
0.804
0.779
slp1
M01986_2.00
Drosophila melanogaster
NRTAAACANN
NNTGTTTAYN
PBM
Weirauch et al.(2014)
pTH6549
0.803
0.674
slp1
M03736_2.00
Drosophila melanogaster
WDYRTAAACAWW
WWTGTTTAYRHW
SELEX
Nitta et al.(2015)
slp1_1
0.803
0.674
slp1
M03737_2.00
Drosophila melanogaster
RTRTAAACAAAYADH
DHTRTTTGTTTAYAY
SELEX
Nitta et al.(2015)
slp1_2
0.803
0.674
slp1
M06474_2.00
Drosophila melanogaster
WRBVWAAACAH
DTGTTTWBVYW
B1H
Mathelier et al.(2014)
MA0458.1
0.803
0.674
slp1
M06195_2.00
Drosophila melanogaster
WRBVWAAACAH
DTGTTTWBVYW
B1H
Zhu et al.(2011)
slp1_NAR_FBgn0003430
0.803
0.674
slp1
M09669_2.00
Drosophila melanogaster
ATGTMAACAMAVV
BBTKTGTTKACAT
Misc
Kulakovskiy et al.(2009)
slp1
0.803
0.674
foxg1a
M01985_2.00
Oryzias latipes
RTAAACAH
DTGTTTAY
PBM
Weirauch et al.(2014)
pTH6729
0.801
0.767
FOXI1
M03026_2.00
Homo sapiens
GTAAACA
TGTTTAC
SELEX
Jolma et al.(2013)
FOXI1_1
0.713
0.628
FOXI1
M03027_2.00
Homo sapiens
RTGTKTACGGTAAACAA
TTGTTTACCGTAMACAY
SELEX
Jolma et al.(2013)
FOXI1_2
0.713
0.628
FOXI1
M04827_2.00
Homo sapiens
NNNNNRTMAACAN
NTGTTKAYNNNNN
SELEX
Yin et al.(2017)
FOXI1_eDBD_HT-SELEX
0.713
0.628
FOXI1
M04829_2.00
Homo sapiens
AAYGTAAACAMW
WKTGTTTACRTT
SELEX
Yin et al.(2017)
FOXI1_FL_HT-SELEX
0.713
0.628
FOXI1
M09095_2.00
Homo sapiens
RRCCAATCAVAD
HTBTGATTGGYY
Misc
Kulakovskiy et al.(2013)
FOXI1_HUMAN.H11MO.0.B
0.713
0.628
Foxi1
M09109_2.00
Mus musculus
RRCCAATCAVAD
HTBTGATTGGYY
Misc
Kulakovskiy et al.(2013)
FOXI1_MOUSE.H11MO.0.B
0.713
0.628
FOXI1
M10556_2.00
Homo sapiens
HAWAYAAAYAHVH
DBDTRTTTRTWTD
Transfac
Matys et al.(2006)
V$HFH3_01
0.713
0.628
FOXI1
M04828_2.00
Homo sapiens
NWWVHRTAAACAH
DTGTTTAYDBWWN
SELEX
Yin et al.(2017)
FOXI1_eDBD_Methyl-HT-SELEX
0.713
0.628
FOXI1
M04830_2.00
Homo sapiens
AAYRTAAACAAW
WTTGTTTAYRTT
SELEX
Yin et al.(2017)
FOXI1_FL_Methyl-HT-SELEX
0.713
0.628
FOXE1
M04845_2.00
Homo sapiens
BVYTAWRYAAACADN
NHTGTTTRYWTARBV
SELEX
Yin et al.(2017)
FOXE1_eDBD_HT-SELEX
0.706
0.616
FOXE1
M04846_2.00
Homo sapiens
BVYTAARYAAACAWH
DWTGTTTRYTTARBV
SELEX
Yin et al.(2017)
FOXE1_eDBD_Methyl-HT-SELEX
0.706
0.616
Foxl1
M00164_2.00
Mus musculus
NNNRTMAAYA
TRTTKAYNNN
PBM
Badis et al.(2009)
Foxl1_2809
0.693
0.651
FOXL1
M03034_2.00
Homo sapiens
RTAAACA
TGTTTAY
SELEX
Jolma et al.(2013)
FOXL1_1
0.693
0.651
FOXL1
M03035_2.00
Homo sapiens
NRTAAAYAAAYAN
NTRTTTRTTTAYN
SELEX
Jolma et al.(2013)
FOXL1_2
0.693
0.651
FOXL1
M10558_2.00
Homo sapiens
DHNVHATAAAYAHNNN
NNNDTRTTTATDBNDH
Transfac
Matys et al.(2006)
V$FREAC7_01
0.693
0.651
foxe3
M01228_2.00
Xenopus tropicalis
WNNVHHMAYW
WRTKDDBNNW
PBM
Lambert et al.(2019)
pTH9824
0.693
0.628
FOXL2
M04847_2.00
Homo sapiens
NVBGHMAACAH
DTGTTKDCVBN
SELEX
Yin et al.(2017)
FOXL2_FL_HT-SELEX
0.691
0.663
Foxl2
M09112_2.00
Mus musculus
DWDWRTAAACA
TGTTTAYWHWH
Misc
Kulakovskiy et al.(2013)
FOXL2_MOUSE.H11MO.0.C
0.691
0.663
FOXL2
M10560_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$FOXL2_Q2
0.691
0.663
FOXL2
M10561_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$FOXL2_Q5
0.691
0.663
FOXL2
M04848_2.00
Homo sapiens
HVCGWMAACAH
DTGTTKWCGBD
SELEX
Yin et al.(2017)
FOXL2_FL_Methyl-HT-SELEX
0.691
0.663
fd64A
M06197_2.00
Drosophila melanogaster
KVWAAACA
TGTTTWBM
B1H
Zhu et al.(2011)
fd64A_SANGER_5_FBgn0004895
0.689
0.651
Foxc2
M00796_2.00
Mus musculus
HNNRHMAAYA
TRTTKDYNND
PBM
Weirauch et al.(2013)
pTH3796
0.686
0.628
FOXC2
M03036_2.00
Homo sapiens
NRTMAATATTDWYN
NRWHAATATTKAYN
SELEX
Jolma et al.(2013)
FOXC2_1
0.686
0.628
FOXC2
M03037_2.00
Homo sapiens
RTAAAYAAACA
TGTTTRTTTAY
SELEX
Jolma et al.(2013)
FOXC2_2
0.686
0.628
FOXC2
M03038_2.00
Homo sapiens
WAHRTMAAYAWW
WWTRTTKAYDTW
SELEX
Jolma et al.(2013)
FOXC2_3
0.686
0.628
FOXC2
M04841_2.00
Homo sapiens
NHVNRYMAACAH
DTGTTKRYNBDN
SELEX
Yin et al.(2017)
FOXC2_eDBD_HT-SELEX_1
0.686
0.628
FOXC2
M04842_2.00
Homo sapiens
RHAMAYAAACAH
DTGTTTRTKTDY
SELEX
Yin et al.(2017)
FOXC2_eDBD_HT-SELEX_2
0.686
0.628
FOXC2
M10559_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$FKHL14_Q2
0.686
0.628
FOXC2
M04843_2.00
Homo sapiens
NHNNRYMAACAN
NTGTTKRYNNDN
SELEX
Yin et al.(2017)
FOXC2_eDBD_Methyl-HT-SELEX_1
0.686
0.628
FOXC2
M04844_2.00
Homo sapiens
VHMMAYAAACAN
NTGTTTRTKKDB
SELEX
Yin et al.(2017)
FOXC2_eDBD_Methyl-HT-SELEX_2
0.686
0.628
For this family, TFs with SR scores >
0.664
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
scaffold33-EXSNAP2012.27
Forkhead
99
187
KPPFSYNALIMMAIRTSKEGRLTLAGIYDYIMSNYPYYRDNKQGWQNSIRHNLSLNKCFVKVPRTYNDPGKGNYWTLDQNCEDEIFIGS
Links
Other
Forkhead
family TFs
Other
Pristionchus exspectatus
TFs
767 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ANIA_10378
Aspergillus nidulans
CADANIAG00009880
D
NCU06399
Neurospora crassa
NCU06399
D
CIMG_08892
Coccidioides immitis
CIMG_08892
I
MCYG_02695
Microsporum canis
MCYG_02695
I
SNOG_08036
Stagonospora nodorum
SNOG_08036
I
A1O1_02576
Capronia coronata
A1O1_02576
I
A1O3_05449
Capronia epimyces
A1O3_05449
I
A1O5_01242
Cladophialophora psammophila
A1O5_01242
I
A1O7_08736
Cladophialophora yegresii
A1O7_08736
I
A1O9_12266
Exophiala aquamarina
A1O9_12266
I
ACRE_013080
Acremonium chrysogenum
ACRE_013080
I
ARB_05956
Arthroderma benhamiae
ARB_05956
I
AUEXF2481DRAFT_4094
Aureobasidium subglaciale
AUEXF2481DRAFT_4094
I
BAUCODRAFT_269899
Baudoinia compniacensis
BAUCODRAFT_269899
I
BBA_00488
Beauveria bassiana
BBA_00488
I
BDDG_07691
Blastomyces dermatitidis
BDDG_07691
I
BGHDH14_bgh03757
Blumeria graminis
BGHDH14_bgh03757
I
ACLA_055970
Aspergillus clavatus
CADACLAG00005179
I
CADAFLAG00008024
Aspergillus flavus
CADAFLAG00008024
I
AFUA_4G02940
Aspergillus fumigatus
CADAFUAG00001401
I
CADANGAG00011236
Aspergillus niger
CADANGAG00011236
I
CADAORAG00000177
Aspergillus oryzae
CADAORAG00000177
I
ATEG_07901
Aspergillus terreus
CADATEAG00000497
I
NFIA_030610
Neosartorya fischeri
CADNFIAG00002762
I
CCM_04263
Cordyceps militaris
CCM_04263
I
CFIO01_07847
Colletotrichum fioriniae
CFIO01_07847
I
CGGC5_1206
Colletotrichum gloeosporioides
CGGC5_1206
I
CH063_13592
Colletotrichum higginsianum
CH063_13592
I
CMQ_2549
Grosmannia clavigera
CMQ_2549
I
Cob_10575
Colletotrichum orbiculare
Cob_10575
I
COCC4DRAFT_40407
Bipolaris maydis
COCC4DRAFT_40407
I
COCCADRAFT_6984
Bipolaris zeicola
COCCADRAFT_6984
I
COCMIDRAFT_33369
Bipolaris oryzae
COCMIDRAFT_33369
I
COCSADRAFT_97657
Bipolaris sorokiniana
COCSADRAFT_97657
I
COCVIDRAFT_17332
Bipolaris victoriae
COCVIDRAFT_17332
I
CPC735_064040
Coccidioides posadasii
CPC735_064040
I
CPUR_06057
Claviceps purpurea
CPUR_06057
I
CSUB01_02829
Colletotrichum sublineola
CSUB01_02829
I
CTHT_0032650
Chaetomium thermophilum
CTHT_0032650
I
DOTSEDRAFT_73911
Dothistroma septosporum
DOTSEDRAFT_73911
I
EPUS_01825
Endocarpon pusillum
EPUS_01825
I
EURHEDRAFT_411156
Aspergillus ruber
EURHEDRAFT_411156
I
EV44_g4901
Erysiphe necator
EV44_g4901
I
F503_08759
Ophiostoma piceae uamh
F503_08759
I
FFUJ_04663
Fusarium fujikuroi
FFUJ_04663
I
FGRRES_09832
Fusarium graminearum
FGRRES_09832
I
FOXG_08221
Fusarium oxysporum
FOXG_08221
I
FPSE_10348
Fusarium pseudograminearum
FPSE_10348
I
FVEG_06450
Fusarium verticillioides
FVEG_06450
I
G647_07711
Cladophialophora carrionii
G647_07711
I
GGTG_08387
Gaeumannomyces graminis
GGTG_08387
I
GLRG_02817
Colletotrichum graminicola
GLRG_02817
I
GSTUM_00012070001
Tuber melanosporum
GSTUM_00012070001
I
H102_02845
Trichophyton rubrum
H102_02845
I
H105_02864
Trichophyton soudanense
H105_02864
I
HCBG_08448
Histoplasma capsulatum
HCBG_08448
I
HMPREF1120_07358
Exophiala dermatitidis
HMPREF1120_07358
I
HMPREF1541_04204
Cyphellophora europaea
HMPREF1541_04204
I
HMPREF1624_06072
Sporothrix schenckii
HMPREF1624_06072
I
LEMA_P075830.1
Leptosphaeria maculans
LEMA_P075830.1
I
M437DRAFT_18084
Aureobasidium melanogenum
M437DRAFT_18084
I
M7I_6846
Glarea lozoyensis
M7I_6846
I
MAC_06402
Metarhizium acridum
MAC_06402
I
MAJ_07228
Metarhizium majus
MAJ_07228
I
MAM_03966
Metarhizium album
MAM_03966
I
MANI_020708
Metarhizium anisopliae
MANI_020708
I
MBM_06253
Marssonina brunnea
MBM_06253
I
MBR_00309
Metarhizium brunneum
MBR_00309
I
MCYG_02695
Arthroderma otae
MCYG_02695
I
MGG_06131
Magnaporthe oryzae
MGG_06131
I
MGU_01258
Metarhizium guizhouense
MGU_01258
I
MGYG_08430
Microsporum gypseum
MGYG_08430
I
MPH_02812
Macrophomina phaseolina
MPH_02812
I
MYCTH_2299061
Myceliophthora thermophila
MYCTH_2299061
I
NechaG76538
Fusarium solani
NechaG76538
I
NEUTE1DRAFT_121024
Neurospora tetrasperma
NEUTE1DRAFT_121024
I
PAAG_01597
Paracoccidioides sp lutzii
PAAG_01597
I
PCH_Pc12g13890
Penicillium rubens
PCH_Pc12g13890
I
PDE_01297
Penicillium oxalicum
PDE_01297
I
PDIP_77620
Penicillium digitatum
PDIP_77620
I
PEX1_065040
Penicillium expansum
PEX1_065040
I
PFICI_05721
Pestalotiopsis fici
PFICI_05721
I
PITC_048290
Penicillium italicum
PITC_048290
I
PMAA_006130
Talaromyces marneffei
PMAA_006130
I
PODANS_3_4790
Podospora anserina
PODANS_3_4790
I
PTRG_08316
Pyrenophora triticirepentis
PTRG_08316
I
PTT_12277
Pyrenophora teres
PTT_12277
I
PV04_09319
Capronia semiimmersa
PV04_09319
I
PV05_00805
Exophiala xenobiotica
PV05_00805
I
PV06_05138
Exophiala oligosperma
PV06_05138
I
PV07_00488
Cladophialophora immunda
PV07_00488
I
PV08_09059
Exophiala spinifera
PV08_09059
I
PV09_01316
Verruconis gallopava
PV09_01316
I
PV10_04959
Exophiala mesophila
PV10_04959
I
PV11_02396
Exophiala sideris
PV11_02396
I
S40285_06955
Stachybotrys chlorohalonata
S40285_06955
I
S40288_05306
Stachybotrys chartarum
S40288_05306
I
SAPIO_CDS7180
Scedosporium apiospermum
SAPIO_CDS7180
I
SEPMUDRAFT_150066
Sphaerulina musiva
SEPMUDRAFT_150066
I
SETTUDRAFT_96438
Setosphaeria turcica
SETTUDRAFT_96438
I
SMAC_00955
Sordaria macrospora
SMAC_00955
I
SNOG_08036
Phaeosphaeria nodorum
SNOG_08036
I
SPBR_00166
Sporothrix brasiliensis
SPBR_00166
I
SS1G_13065
Sclerotinia sclerotiorum
SS1G_13065
I
THITE_2115495
Thielavia terrestris
THITE_2115495
I
TRIATDRAFT_168746
Trichoderma atroviride
TRIATDRAFT_168746
I
TRIREDRAFT_41573
Trichoderma reesei
TRIREDRAFT_41573
I
TRIVIDRAFT_192202
Trichoderma virens
TRIVIDRAFT_192202
I
TRV_07458
Trichophyton verrucosum
TRV_07458
I
TSTA_104870
Talaromyces stipitatus
TSTA_104870
I
U727_0043258041
Penicillium solitum
U727_0043258041
I
UCRNP2_2391
Neofusicoccum parvum
UCRNP2_2391
I
UREG_02800
Uncinocarpus reesii
UREG_02800
I
UV8b_314
Ustilaginoidea virens
UV8b_314
I
VDAG_08933
Verticillium dahliae
VDAG_08933
I
VHEMI03455
Torrubiella hemipterigena
VHEMI03455
I
W97_04573
Coniosporium apollinis
W97_04573
I
X797_002671
Metarhizium robertsii
X797_002671
I
Z517_01506
Fonsecaea pedrosoi
Z517_01506
I
Z518_05180
Rhinocladiella mackenziei
Z518_05180
I
Z519_08509
Cladophialophora bantiana
Z519_08509
I
fgenesh1_kg.C_scaffold_5000057
Cochliobolus heterostrophus C5
fgenesh1_kg.C_scaffold_5000057
I
fgenesh1_pg.sca_18_chr2_1_0000729
Nectria haematococca
fgenesh1_pg.sca_18_chr2_1_0000729
I
scaffold_3-snap.528.1
Neurospora discreta
scaffold_3-snap.528.1
I
e_gw1.00710.230.1
Aspergillus carbonarius
e_gw1.00710.230.1
I
estExt_fgenesh1_pm.C_30735
Cryphonectria parasitica
estExt_fgenesh1_pm.C_30735
I
Pc12g13890
Penicillium chrysogenum
Pc12g13890
I
PMAA_006130
Penicillium marneffei
PMAA_006130
I