CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ACRE_039490
(
Acremonium chrysogenum
)
GATA
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00320 (GATA)
IPR000679
ACRE_039490
T191622_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
sub-1
M01235_2.00
Neurospora crassa
NVMGATCGRNN
NNYCGATCKBN
PBM
Lambert et al.(2019)
pTH8614
0.862
0.972
For this family, TFs with SR scores >
0.802
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
KFH45236
GATA
419
454
CHSCNRVDTPEWRRGPDGARTLCNACGLHYAKLERK
Links
Other
GATA
family TFs
Other
Acremonium chrysogenum
TFs
206 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
F443_16830
Phytophthora parasitica
F443_16830
N
0.000
fgenesh_scip_prom.28083.2092
Phytophthora lateralis
fgenesh_scip_prom.28083.2092
N
0.000
fgenesh_scip_prom.46568.6853
Phytophthora kernoviae
fgenesh_scip_prom.46568.6853
N
0.000
maker-pve_contig_26-fgenesh-gene-0.13
Pythium vexans
maker-pve_contig_26-fgenesh-gene-0.13
N
0.000
Phyra84537
Phytophthora ramorum
Phyra84537
N
0.000
Physo142765
Phytophthora sojae
Physo142765
N
0.000
PITG_17552
Phytophthora infestans
PITG_17552
N
0.000
PYU1_G006460
Pythium ultimum
PYU1_G006460
N
0.000
estExt_fgenesh1_kg.C_90390
Phytophthora capsici
estExt_fgenesh1_kg.C_90390
N
0.000