GATA20 (Arabidopsis thaliana)
GATA

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00320 (GATA) IPR000679 AT2G18380 T191708_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
GATA20
M06884_2.00		 Arabidopsis thaliana
GATCBGAT
ATCVGATC		 Dap-seq
OMalley et al.(2016)
GATA20_col_a		 (Direct) (Direct)
GATA20
M06885_2.00		 Arabidopsis thaliana
HNGATCNGATBND
HNVATCNGATCND		 Dap-seq
OMalley et al.(2016)
GATA20_colamp_a		 (Direct) (Direct)

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
GATA19
M06893_2.00 		Arabidopsis thaliana
BNGATCBGATY
RATCVGATCNV		 Dap-seq
OMalley et al.(2016)
GATA19_col_a 		0.825 0.944
GATA19
M06894_2.00 		Arabidopsis thaliana
HNGATCBGATY
RATCVGATCND		 Dap-seq
OMalley et al.(2016)
GATA19_colamp_a 		0.825 0.944
For this family, TFs with SR scores > 0.802 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
AT2G18380.1 GATA 94 129

Links

Other GATA family TFs
Other Arabidopsis thaliana TFs

130 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
BAUCODRAFT_118634 Baudoinia compniacensis BAUCODRAFT_118634 I 0.000
VHEMI02171 Torrubiella hemipterigena VHEMI02171 I 0.000
KUCA_T00002773001 Kuraishia capsulata KUCA_T00002773001 I 0.000
HMPREF1541_10666 Cyphellophora europaea HMPREF1541_10666 I 0.000
PV06_10546 Exophiala oligosperma PV06_10546 I 0.000
EURHEDRAFT_480926 Aspergillus ruber EURHEDRAFT_480926 I 0.000
MPH_05214 Macrophomina phaseolina MPH_05214 N 0.000
e_gw1.00009.84.1 Aspergillus carbonarius e_gw1.00009.84.1 N 0.000
OIDMADRAFT_122144 Oidiodendron maius OIDMADRAFT_122144 N 0.000
PTRG_00667 Pyrenophora triticirepentis PTRG_00667 N 0.000
PTT_18058 Pyrenophora teres PTT_18058 N 0.000
PV09_02355 Verruconis gallopava PV09_02355 N 0.000
SEPMUDRAFT_146288 Sphaerulina musiva SEPMUDRAFT_146288 N 0.000
SETTUDRAFT_165742 Setosphaeria turcica SETTUDRAFT_165742 N 0.000
SNOG_06887 Phaeosphaeria nodorum SNOG_06887 N 0.000
UCRNP2_5943 Neofusicoccum parvum UCRNP2_5943 N 0.000
V499_04709 Pseudogymnoascus pannorum V499_04709 N 0.000
W97_00715 Coniosporium apollinis W97_00715 N 0.000
X797_002926 Metarhizium robertsii X797_002926 N 0.000
AB07764.1 Alternaria brassicicola AB07764.1 N 0.000
SNOG_06887 Stagonospora nodorum SNOG_06887 N 0.000
COCVIDRAFT_27743 Bipolaris victoriae COCVIDRAFT_27743 N 0.000
Bcin11g04510 Botrytis cinerea Bcin11g04510 N 0.000
BGHDH14_bgh04332 Blumeria graminis BGHDH14_bgh04332 N 0.000
CADAFLAG00002161 Aspergillus flavus CADAFLAG00002161 N 0.000
ANIA_05533 Aspergillus nidulans CADANIAG00003549 N 0.000
COCC4DRAFT_160626 Bipolaris maydis COCC4DRAFT_160626 N 0.000
COCCADRAFT_7354 Bipolaris zeicola COCCADRAFT_7354 N 0.000
COCMIDRAFT_6100 Bipolaris oryzae COCMIDRAFT_6100 N 0.000
COCSADRAFT_229975 Bipolaris sorokiniana COCSADRAFT_229975 N 0.000
MBR_09134 Metarhizium brunneum MBR_09134 N 0.000
EV44_g1635 Erysiphe necator EV44_g1635 N 0.000
FFUJ_06813 Fusarium fujikuroi FFUJ_06813 N 0.000
GMDG_00534 Pseudogymnoascus destructans GMDG_00534 N 0.000
MAC_02136 Metarhizium acridum MAC_02136 N 0.000
MAJ_08454 Metarhizium majus MAJ_08454 N 0.000
MANI_010211 Metarhizium anisopliae MANI_010211 N 0.000
MBM_05784 Marssonina brunnea MBM_05784 N 0.000