CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Bcin05g05530
(
Botrytis cinerea
)
GATA
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00320 (GATA)
IPR000679
Bcin05g05530
T191777_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
wc-2
M02016_2.00
Neurospora crassa
NNHGATNNN
NNNATCDNN
PBM
Weirauch et al.(2014)
pTH8611
0.847
0.889
For this family, TFs with SR scores >
0.802
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Bcin05g05530.1
GATA
454
489
CADCGVMDSPEWRKGPKGPKTLCNACGLRWAKKEKK
Links
Other
GATA
family TFs
Other
Botrytis cinerea
TFs
146 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
AACERI_AaceriADR199C
Saccharomycetaceae sp ashbya aceri
AACERI_AaceriADR199C
N
AGOS_ADR199C
Ashbya gossypii
AGOS_ADR199C
N
HPODL_04599
Ogataea parapolymorpha
HPODL_04599
N
KAFR_0E03310
Kazachstania africana
KAFR_0E03310
N