Bra017501 (Brassica rapa)
GATA

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00320 (GATA) IPR000679 Bra017501 T191959_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
GATA26
M02001_2.00 		Arabidopsis thaliana
NNKATBNNNN
NNNNVATMNN		 PBM
Weirauch et al.(2014)
pTH7490 		0.867 0.944
GATA27
M02005_2.00 		Arabidopsis thaliana
NNGATBNNN
NNNVATCNN		 PBM
Weirauch et al.(2014)
pTH7492 		0.867 0.944
For this family, TFs with SR scores > 0.802 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Bra017501.1-P GATA 7 42

Links

Other GATA family TFs
Other Brassica rapa TFs

69 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
KLLA0_C17072g Kluyveromyces lactis KLLA0_C17072g D
COM2 Saccharomyces cerevisiae YER130C D
SU7_0930 Saccharomyces arboricola SU7_0930 I
SAKL0H24816g Lachancea kluyveri SAKL0H24816g I
6723_YER130C Saccharomyces bayanus 6723_YER130C I
6484_YER130C Saccharomyces paradoxus 6484_YER130C I
6354_YER130C Saccharomyces mikatae 6354_YER130C I
ZYRO0G19140g Zygosaccharomyces rouxii ZYRO0G19140g I
ZBAI_08232 Zygosaccharomyces bailii ZBAI_08232 I
TPHA_0D01050 Tetrapisispora phaffii TPHA_0D01050 I
TDEL_0B04670 Torulaspora delbrueckii TDEL_0B04670 I
AACERI_AaceriACL057W Saccharomycetaceae sp ashbya aceri AACERI_AaceriACL057W I
NDAI_0B01930 Naumovozyma dairenensis NDAI_0B01930 I
LALA0_S01e12970g Lachancea lanzarotensis LALA0_S01e12970g I
KNAG_0D02120 Kazachstania naganishii KNAG_0D02120 I
KAFR_0B02160 Kazachstania africana KAFR_0B02160 I
Ecym_8403 Eremothecium cymbalariae Ecym_8403 I
CAGL0K02145g Candida glabrata CAGL0K02145g I
AGOS_ACL057W Ashbya gossypii AGOS_ACL057W I