Bra037421 (Brassica rapa)
GATA

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00320 (GATA) IPR000679 Bra037421 T191988_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
GATA15
M01997_2.00 		Arabidopsis thaliana
NNHGATCNN
NNGATCDNN		 PBM
Weirauch et al.(2014)
pTH7662 		0.836 0.944
GATA15
M06886_2.00 		Arabidopsis thaliana
GATGATGATGATGATGATS
SATCATCATCATCATCATC		 Dap-seq
OMalley et al.(2016)
GATA15_col_b 		0.836 0.944
GATA16
M06897_2.00 		Arabidopsis thaliana
ATGATGATGATSATGATGATGATSATG
CATSATCATCATCATSATCATCATCAT		 Dap-seq
OMalley et al.(2016)
GATA16_col_a 		0.825 0.944
For this family, TFs with SR scores > 0.802 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Bra037421.1-P GATA 31 66

Links

Other GATA family TFs
Other Brassica rapa TFs

109 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
G647_04666 Cladophialophora carrionii G647_04666 I
PV04_05279 Capronia semiimmersa PV04_05279 I
V499_02646 Pseudogymnoascus pannorum V499_02646 I
Z517_11712 Fonsecaea pedrosoi Z517_11712 I
Z518_10184 Rhinocladiella mackenziei Z518_10184 I
MBM_01735 Marssonina brunnea MBM_01735 I
A1O7_04026 Cladophialophora yegresii A1O7_04026 I
MGG_01776 Magnaporthe oryzae MGG_01776 I
A1O3_02841 Capronia epimyces A1O3_02841 I
GMDG_04017 Pseudogymnoascus destructans GMDG_04017 I
PV10_00514 Exophiala mesophila PV10_00514 I
A1O1_00801 Capronia coronata A1O1_00801 I
OIDMADRAFT_140709 Oidiodendron maius OIDMADRAFT_140709 I
PV09_03074 Verruconis gallopava PV09_03074 N
PV08_08880 Exophiala spinifera PV08_08880 N
PV07_00882 Cladophialophora immunda PV07_00882 N
PV06_09822 Exophiala oligosperma PV06_09822 N
PV05_01304 Exophiala xenobiotica PV05_01304 N
PMAA_049200 Talaromyces marneffei PMAA_049200 N
PV05_00997 Exophiala xenobiotica PV05_00997 N
PV04_08823 Capronia semiimmersa PV04_08823 N
PTT_14634 Pyrenophora teres PTT_14634 N
PTRG_11331 Pyrenophora triticirepentis PTRG_11331 N
SETTUDRAFT_164235 Setosphaeria turcica SETTUDRAFT_164235 N
PITC_029080 Penicillium italicum PITC_029080 N
PEX1_025390 Penicillium expansum PEX1_025390 N
PDIP_22920 Penicillium digitatum PDIP_22920 N
PDE_02184 Penicillium oxalicum PDE_02184 N
PCH_Pc20g01360 Penicillium rubens PCH_Pc20g01360 N
U727_00431380241 Penicillium solitum U727_00431380241 N
PMAA_049200 Penicillium marneffei PMAA_049200 N
Pc20g01360 Penicillium chrysogenum Pc20g01360 N
fgenesh1_pm.00771_#_78 Aspergillus carbonarius fgenesh1_pm.00771_#_78 N
estExt_Genewise1Plus.C_230145 Cochliobolus heterostrophus C5 estExt_Genewise1Plus.C_230145 N
Z519_12024 Cladophialophora bantiana Z519_12024 N
Z519_01916 Cladophialophora bantiana Z519_01916 N
Z518_10852 Rhinocladiella mackenziei Z518_10852 N
Z517_05164 Fonsecaea pedrosoi Z517_05164 N
W97_07490 Coniosporium apollinis W97_07490 N
VHEMI03655 Torrubiella hemipterigena VHEMI03655 N
UREG_02425 Uncinocarpus reesii UREG_02425 N
PV10_04925 Exophiala mesophila PV10_04925 N
TSTA_039140 Talaromyces stipitatus TSTA_039140 N
TRV_02239 Trichophyton verrucosum TRV_02239 N
TRIVIDRAFT_113002 Trichoderma virens TRIVIDRAFT_113002 N
TRIREDRAFT_25244 Trichoderma reesei TRIREDRAFT_25244 N
TESG_03991 Trichophyton tonsurans TESG_03991 N
TEQG_07260 Trichophyton equinum TEQG_07260 N
SNOG_12578 Phaeosphaeria nodorum SNOG_12578 N
MGYG_07575 Microsporum gypseum MGYG_07575 N
PVAR5_4548 Byssochlamys spectabilis PVAR5_4548 N
PV11_02484 Exophiala sideris PV11_02484 N
BDDG_08162 Blastomyces dermatitidis BDDG_08162 N
COCMIDRAFT_98420 Bipolaris oryzae COCMIDRAFT_98420 N
COCCADRAFT_88010 Bipolaris zeicola COCCADRAFT_88010 N
COCC4DRAFT_202082 Bipolaris maydis COCC4DRAFT_202082 N
NFIA_027200 Neosartorya fischeri CADNFIAG00002534 N
CADAORAG00002457 Aspergillus oryzae CADAORAG00002457 N
ANIA_06733 Aspergillus nidulans CADANIAG00007526 N
CADANGAG00005435 Aspergillus niger CADANGAG00005435 N
AFUA_7G05960 Aspergillus fumigatus CADAFUAG00009660 N
CADAFLAG00000474 Aspergillus flavus CADAFLAG00000474 N
ACLA_007650 Aspergillus clavatus CADACLAG00000450 N
COCSADRAFT_314350 Bipolaris sorokiniana COCSADRAFT_314350 N
Bcin07g06120 Botrytis cinerea Bcin07g06120 N
AUEXF2481DRAFT_65216 Aureobasidium subglaciale AUEXF2481DRAFT_65216 N
ARB_01120 Arthroderma benhamiae ARB_01120 N
AOL_s00215g416 Arthrobotrys oligospora AOL_s00215g416 N
A1O5_03005 Cladophialophora psammophila A1O5_03005 N
A1O5_01498 Cladophialophora psammophila A1O5_01498 N
A1O3_00914 Capronia epimyces A1O3_00914 N
A1O1_02509 Capronia coronata A1O1_02509 N
SNOG_12578 Stagonospora nodorum SNOG_12578 N
MCYG_02260 Microsporum canis MCYG_02260 N
HCBG_04319 Histoplasma capsulatum HCBG_04319 N
PAAG_03715 Paracoccidioides sp lutzii PAAG_03715 N
MPH_07157 Macrophomina phaseolina MPH_07157 N
CIMG_08163 Coccidioides immitis CIMG_08163 N
MCYG_02260 Arthroderma otae MCYG_02260 N
M438DRAFT_383887 Aureobasidium pullulans M438DRAFT_383887 N
LEMA_P059350.1 Leptosphaeria maculans LEMA_P059350.1 N
HMPREF1541_09227 Cyphellophora europaea HMPREF1541_09227 N
HMPREF1541_03654 Cyphellophora europaea HMPREF1541_03654 N
HMPREF1120_06404 Exophiala dermatitidis HMPREF1120_06404 N
HMPREF1120_02238 Exophiala dermatitidis HMPREF1120_02238 N
PABG_00768 Paracoccidioides brasiliensis PABG_00768 N
H105_03339 Trichophyton soudanense H105_03339 N
H102_03320 Trichophyton rubrum H102_03320 N
H101_04104 Trichophyton interdigitale H101_04104 N
H072_9547 Dactylellina haptotyla H072_9547 N
GSTUM_00002483001 Tuber melanosporum GSTUM_00002483001 N
G647_07244 Cladophialophora carrionii G647_07244 N
EURHEDRAFT_512897 Aspergillus ruber EURHEDRAFT_512897 N
DOTSEDRAFT_75761 Dothistroma septosporum DOTSEDRAFT_75761 N
CPC735_021860 Coccidioides posadasii CPC735_021860 N
COCVIDRAFT_111354 Bipolaris victoriae COCVIDRAFT_111354 N