CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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CH063_00712
(
Colletotrichum higginsianum
)
GATA
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00320 (GATA)
IPR000679
CH063_00712
T192238_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
wc-1
M01236_2.00
Neurospora crassa
MCGATCGM
KCGATCGK
PBM
Lambert et al.(2019)
pTH9706
0.865
0.944
For this family, TFs with SR scores >
0.802
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
CCF31796
GATA
926
961
CANCHTRNTPEWRRGPSGQRDLCNSCGLRWAKQVGR
Links
Other
GATA
family TFs
Other
Colletotrichum higginsianum
TFs
126 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
DEHA2C16676g
Debaryomyces hansenii
DEHA2C16676g
N
estExt_gwp_genewisePlus_worm.C_chr_3.10726
Pichia stipitis
estExt_gwp_genewisePlus_worm.C_chr_3.10726
N
SPAPADRAFT_149277
Spathaspora passalidarum
SPAPADRAFT_149277
N
PICST_82707
Scheffersomyces stipitis
PICST_82707
N
PGUG_03868
Meyerozyma guilliermondii
PGUG_03868
N
LELG_00073
Lodderomyces elongisporus
LELG_00073
N
GNLVRS01_PISO0L22055g
Millerozyma farinosa
GNLVRS01_PISO0L22055g
N
GNLVRS01_PISO0K22054g
Millerozyma farinosa
GNLVRS01_PISO0K22054g
N
G210_0475
Candida maltosa
G210_0475
N
CLUG_03762
Candida lusitaniae
CLUG_03762
N
CTRG_00892
Candida tropicalis
CTRG_00892
N
CORT_0A01490
Candida orthopsilosis
CORT_0A01490
N
CLUG_03762
Clavispora lusitaniae
CLUG_03762
N
CD36_27130
Candida dubliniensis
CD36_27130
N
CaO19.11237
Candida albicans
CaO19.11237
N
CANTEDRAFT_137002
Candida tenuis
CANTEDRAFT_137002
N
PGUG_03868
Candida guilliermondii
PGUG_03868
N
CPAG_04485
Candida parapsilosis
CPAG_04485
N