CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
CORT_0A04570
(
Candida orthopsilosis
)
GATA
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00320 (GATA)
IPR000679
CORT_0A04570
T192357_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
GLN3
M00048_2.00
Saccharomyces cerevisiae
NHGATAAS
STTATCDN
PBM
Badis et al.(2008)
GLN3_2032
0.823
0.686
GLN3
M01545_2.00
Saccharomyces cerevisiae
HGATARN
NYTATCD
PBM
Zhu et al.(2009)
Gln3
0.823
0.686
GLN3
M07477_2.00
Saccharomyces cerevisiae
GATWR
YWATC
PBM, CSA and or DIP-chip
Mathelier et al.(2014)
MA0307.1
0.823
0.686
GLN3
M08559_2.00
Saccharomyces cerevisiae
GATWR
YWATC
Misc
DeBoer et al.(2011)
YER040W_539
0.823
0.686
For this family, TFs with SR scores >
0.802
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
CCG20845
GATA
341
375
CTNCETRTTPLWRKSNNGDLLCNACGLFYKLHGTL
Links
Other
GATA
family TFs
Other
Candida orthopsilosis
TFs
17 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
PV04_01291
Capronia semiimmersa
PV04_01291
N
PV07_01843
Cladophialophora immunda
PV07_01843
N