GATA27 (Arabidopsis lyrata)
GATA

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00320 (GATA) IPR000679 fgenesh1_pg.C_scaffold_8000066 T193283_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
GATA27
M02005_2.00 		Arabidopsis thaliana
NNGATBNNN
NNNVATCNN		 PBM
Weirauch et al.(2014)
pTH7492 		0.867 1.000
GATA26
M02001_2.00 		Arabidopsis thaliana
NNKATBNNNN
NNNNVATMNN		 PBM
Weirauch et al.(2014)
pTH7490 		0.867 0.944
For this family, TFs with SR scores > 0.802 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
fgenesh1_pg.C_scaffold_8000066 GATA 7 42

Links

Other GATA family TFs
Other Arabidopsis lyrata TFs

69 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ANIA_00568 Aspergillus nidulans CADANIAG00002110 D
A1O3_04931 Capronia epimyces A1O3_04931 I
fgenesh1_pm.00042_#_363 Aspergillus carbonarius fgenesh1_pm.00042_#_363 I
e_gw1.36.139.1 Nectria haematococca e_gw1.36.139.1 I
VDBG_01341 Verticillium alfalfae VDBG_01341 I
VDAG_07912 Verticillium dahliae VDAG_07912 I
U727_00433165191 Penicillium solitum U727_00433165191 I
TSTA_122680 Talaromyces stipitatus TSTA_122680 I
SPBR_03934 Sporothrix brasiliensis SPBR_03934 I
PVAR5_5915 Byssochlamys spectabilis PVAR5_5915 I
PV08_01656 Exophiala spinifera PV08_01656 I
PV06_00500 Exophiala oligosperma PV06_00500 I
PFICI_11852 Pestalotiopsis fici PFICI_11852 I
PDE_07973 Penicillium oxalicum PDE_07973 I
NechaG51686 Fusarium solani NechaG51686 I
HMPREF1624_07087 Sporothrix schenckii HMPREF1624_07087 I
GLRG_07904 Colletotrichum graminicola GLRG_07904 I
EURHEDRAFT_465981 Aspergillus ruber EURHEDRAFT_465981 I
CSUB01_08716 Colletotrichum sublineola CSUB01_08716 I
NFIA_063760 Neosartorya fischeri CADNFIAG00006020 I
NFIA_056930 Neosartorya fischeri CADNFIAG00005285 I
VDBG_01341 Verticillium albo atrum VDBG_01341 I
ATEG_05044 Aspergillus terreus CADATEAG00003666 I
CADAORAG00007699 Aspergillus oryzae CADAORAG00007699 I
ACLA_084900 Aspergillus clavatus CADACLAG00007495 I
CADAORAG00007608 Aspergillus oryzae CADAORAG00007608 I
AFUA_3G13600 Aspergillus fumigatus CADAFUAG00005567 I
CADAFLAG00000859 Aspergillus flavus CADAFLAG00000859 I
AFUA_6G11230 Aspergillus fumigatus CADAFUAG00002339 I
CADAFLAG00004736 Aspergillus flavus CADAFLAG00004736 I
CADAFLAG00004637 Aspergillus flavus CADAFLAG00004637 I
PMAA_012040 Penicillium marneffei PMAA_012040 N
TRIVIDRAFT_158628 Trichoderma virens TRIVIDRAFT_158628 N
PV11_04029 Exophiala sideris PV11_04029 N
PMAA_012040 Talaromyces marneffei PMAA_012040 N
HCBG_03429 Histoplasma capsulatum HCBG_03429 N