OGLUM01G29320 (Oryza glumaepatula)
GATA

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00320 (GATA) IPR000679 OGLUM01G29320 T194380_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
GATA19
M06893_2.00 		Arabidopsis thaliana
BNGATCBGATY
RATCVGATCNV		 Dap-seq
OMalley et al.(2016)
GATA19_col_a 		0.853 0.972
GATA19
M06894_2.00 		Arabidopsis thaliana
HNGATCBGATY
RATCVGATCND		 Dap-seq
OMalley et al.(2016)
GATA19_colamp_a 		0.853 0.972
GATA20
M06884_2.00 		Arabidopsis thaliana
GATCBGAT
ATCVGATC		 Dap-seq
OMalley et al.(2016)
GATA20_col_a 		0.812 0.917
GATA20
M06885_2.00 		Arabidopsis thaliana
HNGATCNGATBND
HNVATCNGATCND		 Dap-seq
OMalley et al.(2016)
GATA20_colamp_a 		0.812 0.917
For this family, TFs with SR scores > 0.802 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
OGLUM01G29320.1 GATA 124 159

Links

Other GATA family TFs
Other Oryza glumaepatula TFs

132 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ENSAMXG00000020233 Astyanax mexicanus ENSAMXG00000020233 I
ENSPFOG00000016287 Poecilia formosa ENSPFOG00000016287 I
arntl2 Danio rerio ENSDARG00000041381 I
arntl2 Tetraodon nigroviridis ENSTNIG00000012142 I
arntl2 Takifugu rubripes ENSTRUG00000007832 I
ENSXMAG00000001482 Xiphophorus maculatus ENSXMAG00000001482 I
ARNTL2 Pan troglodytes ENSPTRG00000004788 N
Tal_R011603 Tyto alba Tal_R011603 N
ARNTL2 Pteropus vampyrus ENSPVAG00000013771 N
ARNTL2 Sus scrofa ENSSSCG00000000551 N
ENSSTOG00000001344 Ictidomys tridecemlineatus ENSSTOG00000001344 N
ENSTGUG00000012163 Taeniopygia guttata ENSTGUG00000012163 N
ENSTSYG00000005541 Tarsius syrichta ENSTSYG00000005541 N
ARNTL2 Tursiops truncatus ENSTTRG00000012339 N
ARNTL2 Vicugna pacos ENSVPAG00000012169 N
Aan_R007949 Calypte anna Aan_R007949 N
Afo_R006305 Aptenodytes forsteri Afo_R006305 N
Brh_R011091 Buceros rhinoceros Brh_R011091 N
Cmyd_10013756 Chelonia mydas Cmyd_10013756 N
ENSP00000266503 Macaca fascicularis ENSP00000266503 N
Gfo_R015185 Geospiza fortis Gfo_R015185 N
Ogr07520 Ophisaurus gracilis Ogr07520 N
Pvit_19389 Pogona vitticeps Pvit_19389 N
ARNTL2 Anolis carolinensis ENSACAG00000012446 N
ENSMEUG00000007045 Macropus eugenii ENSMEUG00000007045 N
ENSAMEG00000011610 Ailuropoda melanoleuca ENSAMEG00000011610 N
ENSAPLG00000008758 Anas platyrhynchos ENSAPLG00000008758 N
ARNTL2 Canis familiaris ENSCAFG00000011089 N
ENSCSAG00000007636 Chlorocebus sabaeus ENSCSAG00000007636 N
ENSFALG00000003942 Ficedula albicollis ENSFALG00000003942 N
ARNTL2 Felis catus ENSFCAG00000000386 N
ARNTL2 Homo sapiens ENSG00000029153 N
ARNTL2 Gallus gallus ENSGALG00000014096 N
ENSLACG00000009646 Latimeria chalumnae ENSLACG00000009646 N
ENSLOCG00000015224 Lepisosteus oculatus ENSLOCG00000015224 N
ENSPSIG00000009416 Pelodiscus sinensis ENSPSIG00000009416 N
ARNTL2 Meleagris gallopavo ENSMGAG00000013735 N
ARNTL2 Macaca mulatta ENSMMUG00000023249 N
ENSMPUG00000010512 Mustela putorius furo ENSMPUG00000010512 N
ENSNLEG00000005463 Nomascus leucogenys ENSNLEG00000005463 N
ENSOARG00000019779 Ovis aries ENSOARG00000019779 N
ARNTL2 Otolemur garnettii ENSOGAG00000011668 N
ENSPANG00000004474 Papio anubis ENSPANG00000004474 N
ARNTL2 Procavia capensis ENSPCAG00000008486 N
ENSPPYG00000004380 Pongo abelii ENSPPYG00000004380 N