OGLUM02G37730 (Oryza glumaepatula)
GATA

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00320 (GATA) IPR000679 OGLUM02G37730 T194386_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
GATA6
M01999_2.00 		Arabidopsis thaliana
NVRATVNDNN
NNHNBATYBN		 PBM
Weirauch et al.(2014)
pTH7317 		0.857 0.833
GATA6
M06890_2.00 		Arabidopsis thaliana
YAGATCTARAWNH
DNWTYTAGATCTR		 Dap-seq
OMalley et al.(2016)
GATA6_col200_a 		0.857 0.833
Q76DY3_TOBAC
M10600_2.00 		Nicotiana tabacum Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$AGP1_01 		0.851 0.889
GATA1
M01998_2.00 		Arabidopsis thaliana
NNNVATBNNN
NNNVATBNNN		 PBM
Weirauch et al.(2014)
pTH8144 		0.851 0.861
GATA1
M06887_2.00 		Arabidopsis thaliana
RYGRTGRTGRTGRTG
CAYCAYCAYCAYCRY		 Dap-seq
OMalley et al.(2016)
GATA1_col_a 		0.851 0.861
GATA1
M06888_2.00 		Arabidopsis thaliana
HNYAGATCYRRWYB
VRWYYRGATCTRND		 Dap-seq
OMalley et al.(2016)
GATA1_colamp_a 		0.851 0.861
GATA4
M00727_2.00 		Arabidopsis thaliana
NNNGATCNNN
NNNGATCNNN		 PBM
Chang et al.(2013)
pTH7196 		0.848 0.889
GATA4
M06891_2.00 		Arabidopsis thaliana
HNNYRGATCYRRWYY
RRWYYRGATCYRNND		 Dap-seq
OMalley et al.(2016)
GATA4_col_a 		0.848 0.889
GATA9
M02002_2.00 		Arabidopsis thaliana
NHAGATCTDNN
NNHAGATCTDN		 PBM
Weirauch et al.(2014)
pTH7378 		0.837 0.833
GATA8
M02000_2.00 		Arabidopsis thaliana
NNGATYYVN
NBRRATCNN		 PBM
Weirauch et al.(2014)
pTH7665 		0.832 0.833
GATA12
M00863_2.00 		Arabidopsis thaliana
NNNGATBN
NVATCNNN		 PBM
Franco-Zorrilla et al.(2014)
GATA12 		0.832 0.806
GATA12
M06895_2.00 		Arabidopsis thaliana
DWWYYAGATCYRR
YYRGATCTRRWWH		 Dap-seq
OMalley et al.(2016)
GATA12_col_a 		0.832 0.806
GATA12
M06896_2.00 		Arabidopsis thaliana
YRGATCTRRWYYNDN
NHNRRWYYAGATCYR		 Dap-seq
OMalley et al.(2016)
GATA12_colamp_a 		0.832 0.806
GATA7
M02004_2.00 		Arabidopsis thaliana
NNNNATNNNN
NNNNATNNNN		 PBM
Weirauch et al.(2014)
pTH7658 		0.830 0.778
GATA10
M01994_2.00 		Arabidopsis thaliana
CAGATCTA
TAGATCTG		 PBM
Weirauch et al.(2014)
pTH7615 		0.819 0.778
GATA11
M01995_2.00 		Arabidopsis thaliana
CAGATCTH
DAGATCTG		 PBM
Weirauch et al.(2014)
pTH7486 		0.819 0.778
GATA11
M06882_2.00 		Arabidopsis thaliana
HYYAGATCYRRWWHH
DDWWYYRGATCTRRD		 Dap-seq
OMalley et al.(2016)
GATA11_col_a 		0.819 0.778
GATA3
M02003_2.00 		Arabidopsis thaliana
NNNNGATBNN
NNVATCNNNN		 PBM
Weirauch et al.(2014)
pTH7657 		0.819 0.750
For this family, TFs with SR scores > 0.802 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
OGLUM02G37730.1 GATA 335 370
OGLUM02G37730.2 GATA 335 370

Links

Other GATA family TFs
Other Oryza glumaepatula TFs

610 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
SMAR006121 Strigamia maritima SMAR006121 I 0.000
LDEC011073 Leptinotarsa decemlineata LDEC011073 I 0.000
AFAF010393 Anopheles farauti AFAF010393 N 0.000
PYU1_G013091 Pythium ultimum PYU1_G013091 N 0.000
SINV22763 Solenopsis invicta SINV22763 N 0.000
TC013586 Tribolium castaneum TC013586 N 0.000
YQE_09239 Dendroctonus ponderosae YQE_09239 N 0.000
Cflo_01219--XP_395512.3_APIME Camponotus floridanus Cflo_01219--XP_395512.3_APIME N 0.000
Hsal_01939--XP_395512.3_APIME Harpegnathos saltator Hsal_01939--XP_395512.3_APIME N 0.000
CLEC012210 Cimex lectularius CLEC012210 N 0.000
HHAL005964-PA Halyomorpha halys HHAL005964-PA N 0.000
LCUP015823 Lucilia cuprina LCUP015823 N 0.000
PITG_09630 Phytophthora infestans PITG_09630 N 0.000
AFUN009891 Anopheles funestus AFUN009891 N 0.000
AMEM013442 Anopheles merus AMEM013442 N 0.000
ASTEI11512 Anopheles stephensi ASTEI11512 N 0.000
PPAI002183 Phlebotomus papatasi PPAI002183 N 0.000
DME_0001005001 Dracunculus medinensis DME_0001005001 N 0.000
L596_g4117 Steinernema carpocapsae L596_g4117 N 0.000
L889_g180 Steinernema feltiae L889_g180 N 0.000
L892_g19705 Steinernema scapterisci L892_g19705 N 0.000
L893_g29191 Steinernema glaseri L893_g29191 N 0.000
L898_g7337 Steinernema monticolum L898_g7337 N 0.000
SBAD_0000668001 Soboliphyme baturini SBAD_0000668001 N 0.000
GK22507 Drosophila willistoni FBgn0224484 N 0.000
ACEP26642 Atta cephalotes ACEP26642 N 0.000
BGIBMGA010273 Bombyx mori BGIBMGA010273 N 0.000
CJA11729 Caenorhabditis japonica CJA11729 N 0.000
F443_10259 Phytophthora parasitica F443_10259 N 0.000
osa Drosophila yakuba FBgn0041640 N 0.000
GF23141 Drosophila ananassae FBgn0100135 N 0.000
GG16758 Drosophila erecta FBgn0108988 N 0.000
GH15872 Drosophila grimshawi FBgn0123343 N 0.000
GI23637 Drosophila mojavensis FBgn0146363 N 0.000
GM15347 Drosophila sechellia FBgn0170267 N 0.000
GJ24712 Drosophila virilis FBgn0211788 N 0.000
AAEL017280 Aedes aegypti AAEL017280 N 0.000
GA26236 Drosophila pseudoobscura FBgn0247610 N 0.000
osa Drosophila melanogaster FBgn0261885 N 0.000
GB44899 Apis mellifera GB44899 N 0.000
KGM_12579 Danaus plexippus KGM_12579 N 0.000
maker-par_contig_374-snap-gene-0.8 Pythium arrhenomanes maker-par_contig_374-snap-gene-0.8 N 0.000
maker-piw_contig_840-fgenesh-gene-0.5 Pythium iwayamai maker-piw_contig_840-fgenesh-gene-0.5 N 0.000
PHUM080380 Pediculus humanus PHUM080380 N 0.000
Phyra75827 Phytophthora ramorum Phyra75827 N 0.000
Physo141839 Phytophthora sojae Physo141839 N 0.000
PITG_09522 Phytophthora infestans PITG_09522 N 0.000