CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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PLEOSDRAFT_1094410
(
Pleurotus ostreatus
)
GATA
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00320 (GATA)
IPR000679
PLEOSDRAFT_1094410
T194836_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
sub-1
M01235_2.00
Neurospora crassa
NVMGATCGRNN
NNYCGATCKBN
PBM
Lambert et al.(2019)
pTH8614
0.856
0.889
For this family, TFs with SR scores >
0.802
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
KDQ24709
GATA
527
562
CHSCNIRETPEWRRGPDGARTLCNACGLHYAKLMRK
Links
Other
GATA
family TFs
Other
Pleurotus ostreatus
TFs
203 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
PCH_Pc24g00890
Penicillium rubens
PCH_Pc24g00890
N
0.000
PCH_Pc24g01780
Penicillium rubens
PCH_Pc24g01780
N
0.000
PCH_Pc24g02380
Penicillium rubens
PCH_Pc24g02380
N
0.000
PDIP_86290
Penicillium digitatum
PDIP_86290
N
0.000
Pc24g01780
Penicillium chrysogenum
Pc24g01780
N
0.000
Pc24g02380
Penicillium chrysogenum
Pc24g02380
N
0.000