CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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SNOG_12044
(
Phaeosphaeria nodorum
)
GATA
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00320 (GATA)
IPR000679
SNOG_12044
T195279_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
wc-1
M01236_2.00
Neurospora crassa
MCGATCGM
KCGATCGK
PBM
Lambert et al.(2019)
pTH9706
0.865
0.944
For this family, TFs with SR scores >
0.802
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
SNOT_12044
GATA
956
991
CANCHTRTTPEWRRGPSGNRDLCNSCGLRWAKQQGR
Links
Other
GATA
family TFs
Other
Phaeosphaeria nodorum
TFs
126 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
tou
Drosophila melanogaster
FBgn0033636
N
0.000
GA10623
Drosophila pseudoobscura
FBgn0070679
N
0.000
GG22641
Drosophila erecta
FBgn0114812
N
0.000
GH20497
Drosophila grimshawi
FBgn0127960
N
0.000
GI21040
Drosophila mojavensis
FBgn0143772
N
0.000
GL10676
Drosophila persimilis
FBgn0148286
N
0.000
GM20421
Drosophila sechellia
FBgn0175304
N
0.000
GD25895
Drosophila simulans
FBgn0197174
N
0.000
GJ21968
Drosophila virilis
FBgn0209083
N
0.000
GK22224
Drosophila willistoni
FBgn0224209
N
0.000
GE13512
Drosophila yakuba
FBgn0231179
N
0.000
MDOA012712
Musca domestica
MDOA012712
N
0.000