CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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TRIVIDRAFT_31745
(
Trichoderma virens
)
GATA
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00320 (GATA)
IPR000679
TRIVIDRAFT_31745
T195545_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
wc-2
M02016_2.00
Neurospora crassa
NNHGATNNN
NNNATCDNN
PBM
Weirauch et al.(2014)
pTH8611
0.856
0.972
For this family, TFs with SR scores >
0.802
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
EHK25160
GATA
421
456
CTDCGTLDSPEWRKGPNGPKTLCNACGLRWAKKEKK
Links
Other
GATA
family TFs
Other
Trichoderma virens
TFs
146 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
NFXL1
Pan troglodytes
ENSPTRG00000016035
N
0.000
ENSNLEG00000017372
Nomascus leucogenys
ENSNLEG00000017372
N
0.000
ENSOANG00000012970
Ornithorhynchus anatinus
ENSOANG00000012970
N
0.000
ENSOARG00000016535
Ovis aries
ENSOARG00000016535
N
0.000
NFXL1
Oryctolagus cuniculus
ENSOCUG00000008876
N
0.000
NFXL1
Otolemur garnettii
ENSOGAG00000006702
N
0.000
ENSPMAG00000002716
Petromyzon marinus
ENSPMAG00000002716
N
0.000
ENSPPYG00000014711
Pongo abelii
ENSPPYG00000014711
N
0.000
ENSPSIG00000010167
Pelodiscus sinensis
ENSPSIG00000010167
N
0.000
Nfxl1
Mus musculus
ENSMUSG00000072889
N
0.000
NFXL1
Sorex araneus
ENSSARG00000006641
N
0.000
ENSSHAG00000002875
Sarcophilus harrisii
ENSSHAG00000002875
N
0.000
NFXL1
Sus scrofa
ENSSSCG00000008816
N
0.000
NFXL1
Taeniopygia guttata
ENSTGUG00000008171
N
0.000
NFXL1
Tursiops truncatus
ENSTTRG00000003273
N
0.000
Aan_R004132
Calypte anna
Aan_R004132
N
0.000
ENSP00000370949
Macaca fascicularis
ENSP00000370949
N
0.000
Myotis_brandtii_NFXL1_10022858
Myotis brandtii
Myotis_brandtii_NFXL1_10022858
N
0.000
NFXL1
Homo sapiens
ENSG00000170448
N
0.000
ENSAPLG00000010735
Anas platyrhynchos
ENSAPLG00000010735
N
0.000
NFXL1
Bos taurus
ENSBTAG00000002201
N
0.000
NFXL1
Canis familiaris
ENSCAFG00000001913
N
0.000
NFXL1
Callithrix jacchus
ENSCJAG00000018893
N
0.000
NFXL1
Cavia porcellus
ENSCPOG00000014371
N
0.000
ENSCSAG00000017157
Chlorocebus sabaeus
ENSCSAG00000017157
N
0.000
NFXL1
Equus caballus
ENSECAG00000022401
N
0.000
NFXL1
Felis catus
ENSFCAG00000031403
N
0.000
ENSAMEG00000003238
Ailuropoda melanoleuca
ENSAMEG00000003238
N
0.000
nfxl1
Gasterosteus aculeatus
ENSGACG00000000304
N
0.000
NFXL1
Gallus gallus
ENSGALG00000014138
N
0.000
NFXL1
Gorilla gorilla
ENSGGOG00000008489
N
0.000
ENSGMOG00000016659
Gadus morhua
ENSGMOG00000016659
N
0.000
NFXL1
Loxodonta africana
ENSLAFG00000014027
N
0.000
NFXL1
Myotis lucifugus
ENSMLUG00000008367
N
0.000
NFXL1
Monodelphis domestica
ENSMODG00000020621
N
0.000