CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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TSTA_027060
(
Talaromyces stipitatus
)
GATA
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00320 (GATA)
IPR000679
TSTA_027060
T195553_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
sub-1
M01235_2.00
Neurospora crassa
NVMGATCGRNN
NNYCGATCKBN
PBM
Lambert et al.(2019)
pTH8614
0.861
0.917
For this family, TFs with SR scores >
0.802
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
EED19407
GATA
380
415
CHSCNRAETPEWRRGPDGARTLCNACGLHYAKLTRK
Links
Other
GATA
family TFs
Other
Talaromyces stipitatus
TFs
204 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
MLOC_1442
Hordeum vulgare
MLOC_1442
N
OLONG_026960
Oryza longistaminata
OLONG_026960
N
OPUNC07G19470
Oryza punctata
OPUNC07G19470
N
Sb02g038040
Sorghum bicolor
Sb02g038040
N
Si029796m.g
Setaria italica
Si029796m.g
N
Traes_2BS_FDABA21A7
Triticum aestivum
Traes_2BS_FDABA21A7
N