29634.m002146 (Ricinus communis)
GATA

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00320 (GATA) IPR000679 29634.m002146 T195991_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
GATA19
M06893_2.00 		Arabidopsis thaliana
BNGATCBGATY
RATCVGATCNV		 Dap-seq
OMalley et al.(2016)
GATA19_col_a 		0.867 1.000
GATA19
M06894_2.00 		Arabidopsis thaliana
HNGATCBGATY
RATCVGATCND		 Dap-seq
OMalley et al.(2016)
GATA19_colamp_a 		0.867 1.000
GATA20
M06884_2.00 		Arabidopsis thaliana
GATCBGAT
ATCVGATC		 Dap-seq
OMalley et al.(2016)
GATA20_col_a 		0.825 0.944
GATA20
M06885_2.00 		Arabidopsis thaliana
HNGATCNGATBND
HNVATCNGATCND		 Dap-seq
OMalley et al.(2016)
GATA20_colamp_a 		0.825 0.944
For this family, TFs with SR scores > 0.802 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
29634.m002146 GATA 217 252

Links

Other GATA family TFs
Other Ricinus communis TFs

132 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Su(H) Drosophila melanogaster FBgn0004837 D
ACYPI009607 Acyrthosiphon pisum ACYPI009607 I
PPAI000792 Phlebotomus papatasi PPAI000792 I
ASTEI01929 Anopheles stephensi ASTEI01929 I
AMEC017285 Anopheles melas AMEC017285 I
AARA009493 Anopheles arabiensis AARA009493 I
AALB007981 Anopheles albimanus AALB007981 I
tetur11g00180 Tetranychus urticae tetur11g00180 I
NV17858 Nasonia vitripennis NV17858 I
MCINX002989 Melitaea cinxia MCINX002989 I
L798_15068 Zootermopsis nevadensis L798_15068 I
GA25243 Drosophila pseudoobscura FBgn0246624 I
GA25242 Drosophila pseudoobscura FBgn0246623 I
GE20814 Drosophila yakuba FBgn0238107 I
GJ11880 Drosophila virilis FBgn0199134 I
GM15894 Drosophila sechellia FBgn0170810 I
GH10915 Drosophila grimshawi FBgn0118396 I
AAEL006419 Aedes aegypti AAEL006419 I
BGIBMGA003113 Bombyx mori BGIBMGA003113 I
DAPPUDRAFT_98470 Daphnia pulex DAPPUDRAFT_98470 I
rbpja Danio rerio ENSDARG00000003398 I
rbpjb Danio rerio ENSDARG00000052091 I
RBPJ Meleagris gallopavo ENSMGAG00000012418 I
RBPJ Macaca mulatta ENSMMUG00000015828 I
RBPJ Monodelphis domestica ENSMODG00000000129 I
ENSSHAG00000003329 Sarcophilus harrisii ENSSHAG00000003329 I
Su(H) Drosophila simulans FBgn0027417 I
GF14905 Drosophila ananassae FBgn0091930 I
GG25142 Drosophila erecta FBgn0117267 I
GL26026 Drosophila persimilis FBgn0163608 I
HNAJ_0000209001 Hymenolepis nana HNAJ_0000209001 N
SPER_0003346601 Spirometra erinaceieuropaei SPER_0003346601 N
TASK_0000348801 Taenia asiatica TASK_0000348801 N