30146.m003524 (Ricinus communis)
GATA

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00320 (GATA) IPR000679 30146.m003524 T196001_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
GATA9
M02002_2.00 		Arabidopsis thaliana
NHAGATCTDNN
NNHAGATCTDN		 PBM
Weirauch et al.(2014)
pTH7378 		0.862 0.972
GATA12
M00863_2.00 		Arabidopsis thaliana
NNNGATBN
NVATCNNN		 PBM
Franco-Zorrilla et al.(2014)
GATA12 		0.857 0.944
GATA12
M06895_2.00 		Arabidopsis thaliana
DWWYYAGATCYRR
YYRGATCTRRWWH		 Dap-seq
OMalley et al.(2016)
GATA12_col_a 		0.857 0.944
GATA12
M06896_2.00 		Arabidopsis thaliana
YRGATCTRRWYYNDN
NHNRRWYYAGATCYR		 Dap-seq
OMalley et al.(2016)
GATA12_colamp_a 		0.857 0.944
GATA4
M00727_2.00 		Arabidopsis thaliana
NNNGATCNNN
NNNGATCNNN		 PBM
Chang et al.(2013)
pTH7196 		0.851 0.917
GATA4
M06891_2.00 		Arabidopsis thaliana
HNNYRGATCYRRWYY
RRWYYRGATCYRNND		 Dap-seq
OMalley et al.(2016)
GATA4_col_a 		0.851 0.917
GATA8
M02000_2.00 		Arabidopsis thaliana
NNGATYYVN
NBRRATCNN		 PBM
Weirauch et al.(2014)
pTH7665 		0.843 0.833
Q76DY3_TOBAC
M10600_2.00 		Nicotiana tabacum Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$AGP1_01 		0.843 0.833
GATA1
M01998_2.00 		Arabidopsis thaliana
NNNVATBNNN
NNNVATBNNN		 PBM
Weirauch et al.(2014)
pTH8144 		0.842 0.889
GATA1
M06887_2.00 		Arabidopsis thaliana
RYGRTGRTGRTGRTG
CAYCAYCAYCAYCRY		 Dap-seq
OMalley et al.(2016)
GATA1_col_a 		0.842 0.889
GATA1
M06888_2.00 		Arabidopsis thaliana
HNYAGATCYRRWYB
VRWYYRGATCTRND		 Dap-seq
OMalley et al.(2016)
GATA1_colamp_a 		0.842 0.889
GATA3
M02003_2.00 		Arabidopsis thaliana
NNNNGATBNN
NNVATCNNNN		 PBM
Weirauch et al.(2014)
pTH7657 		0.833 0.778
GATA6
M01999_2.00 		Arabidopsis thaliana
NVRATVNDNN
NNHNBATYBN		 PBM
Weirauch et al.(2014)
pTH7317 		0.832 0.778
GATA6
M06890_2.00 		Arabidopsis thaliana
YAGATCTARAWNH
DNWTYTAGATCTR		 Dap-seq
OMalley et al.(2016)
GATA6_col200_a 		0.832 0.778
GATA10
M01994_2.00 		Arabidopsis thaliana
CAGATCTA
TAGATCTG		 PBM
Weirauch et al.(2014)
pTH7615 		0.819 0.778
GATA11
M01995_2.00 		Arabidopsis thaliana
CAGATCTH
DAGATCTG		 PBM
Weirauch et al.(2014)
pTH7486 		0.819 0.778
GATA11
M06882_2.00 		Arabidopsis thaliana
HYYAGATCYRRWWHH
DDWWYYRGATCTRRD		 Dap-seq
OMalley et al.(2016)
GATA11_col_a 		0.819 0.778
GATA7
M02004_2.00 		Arabidopsis thaliana
NNNNATNNNN
NNNNATNNNN		 PBM
Weirauch et al.(2014)
pTH7658 		0.819 0.750
For this family, TFs with SR scores > 0.802 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
30146.m003524 GATA 233 268

Links

Other GATA family TFs
Other Ricinus communis TFs

614 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
MTERF3 Sus scrofa ENSSSCG00000006090 N 0.000
ENSNLEG00000003582 Nomascus leucogenys ENSNLEG00000003582 N 0.000
ENSOARG00000005313 Ovis aries ENSOARG00000005313 N 0.000
MTERF3 Otolemur garnettii ENSOGAG00000004303 N 0.000
ENSPANG00000000418 Papio anubis ENSPANG00000000418 N 0.000
MTERF3 Procavia capensis ENSPCAG00000009302 N 0.000
ENSPPYG00000018764 Pongo abelii ENSPPYG00000018764 N 0.000
MTERF3 Pan troglodytes ENSPTRG00000020441 N 0.000
Mterf3 Rattus norvegicus ENSRNOG00000004492 N 0.000
Mterf3 Mus musculus ENSMUSG00000021519 N 0.000
ENSSTOG00000008021 Ictidomys tridecemlineatus ENSSTOG00000008021 N 0.000
MTERF3 Tupaia belangeri ENSTBEG00000002615 N 0.000
MTERF3 Tursiops truncatus ENSTTRG00000007349 N 0.000
MTERF3 Vicugna pacos ENSVPAG00000004132 N 0.000
ENSBTAP00000001994-D1 Bos grunniens ENSBTAP00000001994-D1 N 0.000
ENSP00000287025 Macaca fascicularis ENSP00000287025 N 0.000
Myotis_brandtii_MTERFD1_10032119 Myotis brandtii Myotis_brandtii_MTERFD1_10032119 N 0.000
mterf3 Xenopus tropicalis XB-GENE-6454740 N 0.000
MTERF3 Equus caballus ENSECAG00000012943 N 0.000
MTERF3 Bos taurus ENSBTAG00000001522 N 0.000
MTERF3 Canis familiaris ENSCAFG00000009460 N 0.000
MTERF3 Choloepus hoffmanni ENSCHOG00000007893 N 0.000
MTERF3 Callithrix jacchus ENSCJAG00000020561 N 0.000
MTERF3 Cavia porcellus ENSCPOG00000003487 N 0.000
ENSCSAG00000012442 Chlorocebus sabaeus ENSCSAG00000012442 N 0.000
MTERF3 Dasypus novemcinctus ENSDNOG00000041739 N 0.000
Mterf3 Dipodomys ordii ENSDORG00000010477 N 0.000
ENSAMEG00000007290 Ailuropoda melanoleuca ENSAMEG00000007290 N 0.000
MTERF3 Echinops telfairi ENSETEG00000011372 N 0.000
MTERF3 Felis catus ENSFCAG00000028511 N 0.000
MTERF3 Homo sapiens ENSG00000156469 N 0.000
MTERF3 Gorilla gorilla ENSGGOG00000011535 N 0.000
MTERF3 Loxodonta africana ENSLAFG00000002544 N 0.000
MTERF3 Myotis lucifugus ENSMLUG00000007186 N 0.000
MTERF3 Macaca mulatta ENSMMUG00000008808 N 0.000
ENSMPUG00000008759 Mustela putorius furo ENSMPUG00000008759 N 0.000