CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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estExt_fgeneshMC_pm.C_70039
(
Mucor circinelloides
)
GATA
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00320 (GATA)
IPR000679
estExt_fgeneshMC_pm.C_70039
T196146_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
wc-2
M02016_2.00
Neurospora crassa
NNHGATNNN
NNNATCDNN
PBM
Weirauch et al.(2014)
pTH8611
0.805
0.778
For this family, TFs with SR scores >
0.802
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
estExt_fgeneshMC_pm.C_70039
GATA
318
353
CTDCGRTDAPEWRRGPRGPKTLCNACGLRWAKTNKA
Links
Other
GATA
family TFs
Other
Mucor circinelloides
TFs
139 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
L892_g30102
Steinernema scapterisci
L892_g30102
N
0.000
RSKR_0000604900
Rhabditophanes kr3021
RSKR_0000604900
N
0.000
SVUK_0001022701
Strongylus vulgaris
SVUK_0001022701
N
0.000