CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Sakowv30021369m.g
(
Saccoglossus kowalevskii
)
GATA
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00320 (GATA)
IPR000679
Sakowv30021369m.g
T196355_2.00
JGI:Metazome (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
23929857_peptide
GATA
236
268
CSNCQTSSSQVHSTPKGSLCNACYSYWRRTGVM
23929858_peptide
GATA
235
267
CSNCQTSSSQVHSTPKGSLCNACYSYWRRTGVM
23929859_peptide
GATA
206
238
CSNCQTSSSQVHSTPKGSLCNACYSYWRRTGVM
23929860_peptide
GATA
205
237
CSNCQTSSSQVHSTPKGSLCNACYSYWRRTGVM
23929861_peptide
GATA
201
233
CSNCQTSSSQVHSTPKGSLCNACYSYWRRTGVM
23929862_peptide
GATA
191
223
CSNCQTSSSQVHSTPKGSLCNACYSYWRRTGVM
Links
Other
GATA
family TFs
Other
Saccoglossus kowalevskii
TFs
4 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
SPU_022856
Strongylocentrotus purpuratus
SPU_022856
N
0.760
fgenesh2_pg.scaffold_136000072
Branchiostoma floridae
fgenesh2_pg.scaffold_136000072
N
0.800
BGLB003610
Biomphalaria glabrata
BGLB003610
N
0.760