CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Aquca_020_00318
(
Aquilegia coerulea
)
GATA
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00320 (GATA)
IPR000679
Aquca_020_00318
T196376_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
GATA4
M00727_2.00
Arabidopsis thaliana
NNNGATCNNN
NNNGATCNNN
PBM
Chang et al.(2013)
pTH7196
0.857
0.917
GATA4
M06891_2.00
Arabidopsis thaliana
HNNYRGATCYRRWYY
RRWYYRGATCYRNND
Dap-seq
OMalley et al.(2016)
GATA4_col_a
0.857
0.917
GATA12
M00863_2.00
Arabidopsis thaliana
NNNGATBN
NVATCNNN
PBM
Franco-Zorrilla et al.(2014)
GATA12
0.856
0.972
GATA12
M06895_2.00
Arabidopsis thaliana
DWWYYAGATCYRR
YYRGATCTRRWWH
Dap-seq
OMalley et al.(2016)
GATA12_col_a
0.856
0.972
GATA12
M06896_2.00
Arabidopsis thaliana
YRGATCTRRWYYNDN
NHNRRWYYAGATCYR
Dap-seq
OMalley et al.(2016)
GATA12_colamp_a
0.856
0.972
GATA9
M02002_2.00
Arabidopsis thaliana
NHAGATCTDNN
NNHAGATCTDN
PBM
Weirauch et al.(2014)
pTH7378
0.851
0.944
GATA6
M01999_2.00
Arabidopsis thaliana
NVRATVNDNN
NNHNBATYBN
PBM
Weirauch et al.(2014)
pTH7317
0.843
0.806
GATA6
M06890_2.00
Arabidopsis thaliana
YAGATCTARAWNH
DNWTYTAGATCTR
Dap-seq
OMalley et al.(2016)
GATA6_col200_a
0.843
0.806
GATA3
M02003_2.00
Arabidopsis thaliana
NNNNGATBNN
NNVATCNNNN
PBM
Weirauch et al.(2014)
pTH7657
0.838
0.806
GATA1
M01998_2.00
Arabidopsis thaliana
NNNVATBNNN
NNNVATBNNN
PBM
Weirauch et al.(2014)
pTH8144
0.832
0.833
GATA1
M06887_2.00
Arabidopsis thaliana
RYGRTGRTGRTGRTG
CAYCAYCAYCAYCRY
Dap-seq
OMalley et al.(2016)
GATA1_col_a
0.832
0.833
GATA1
M06888_2.00
Arabidopsis thaliana
HNYAGATCYRRWYB
VRWYYRGATCTRND
Dap-seq
OMalley et al.(2016)
GATA1_colamp_a
0.832
0.833
GATA8
M02000_2.00
Arabidopsis thaliana
NNGATYYVN
NBRRATCNN
PBM
Weirauch et al.(2014)
pTH7665
0.832
0.806
Q76DY3_TOBAC
M10600_2.00
Nicotiana tabacum
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$AGP1_01
0.832
0.806
GATA7
M02004_2.00
Arabidopsis thaliana
NNNNATNNNN
NNNNATNNNN
PBM
Weirauch et al.(2014)
pTH7658
0.830
0.778
GATA10
M01994_2.00
Arabidopsis thaliana
CAGATCTA
TAGATCTG
PBM
Weirauch et al.(2014)
pTH7615
0.823
0.806
GATA11
M01995_2.00
Arabidopsis thaliana
CAGATCTH
DAGATCTG
PBM
Weirauch et al.(2014)
pTH7486
0.823
0.806
GATA11
M06882_2.00
Arabidopsis thaliana
HYYAGATCYRRWWHH
DDWWYYRGATCTRRD
Dap-seq
OMalley et al.(2016)
GATA11_col_a
0.823
0.806
For this family, TFs with SR scores >
0.802
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Aquca_020_00318.1
GATA
239
274
CLHCATDKTPQWRTGPLGPKTLCNACGVRYKSGRLV
Links
Other
GATA
family TFs
Other
Aquilegia coerulea
TFs
612 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
vad-5
Neurospora crassa
NCU06799
D
CIMG_03219
Coccidioides immitis
CIMG_03219
I
MCYG_06533
Microsporum canis
MCYG_06533
I
VDBG_05795
Verticillium albo atrum
VDBG_05795
I
A1O1_02309
Capronia coronata
A1O1_02309
I
A1O3_00720
Capronia epimyces
A1O3_00720
I
A1O5_12837
Cladophialophora psammophila
A1O5_12837
I
A1O7_05347
Cladophialophora yegresii
A1O7_05347
I
A1O9_03650
Exophiala aquamarina
A1O9_03650
I
ACRE_005560
Acremonium chrysogenum
ACRE_005560
I
AOL_s00097g503
Arthrobotrys oligospora
AOL_s00097g503
I
AUEXF2481DRAFT_31334
Aureobasidium subglaciale
AUEXF2481DRAFT_31334
I
BAUCODRAFT_78329
Baudoinia compniacensis
BAUCODRAFT_78329
I
BBA_09506
Beauveria bassiana
BBA_09506
I
Bcin03g00870
Botrytis cinerea
Bcin03g00870
I
BDDG_02902
Blastomyces dermatitidis
BDDG_02902
I
BGHDH14_bgh01602
Blumeria graminis
BGHDH14_bgh01602
I
ACLA_020150
Aspergillus clavatus
CADACLAG00002323
I
CADAFLAG00001220
Aspergillus flavus
CADAFLAG00001220
I
CADANGAG00001338
Aspergillus niger
CADANGAG00001338
I
ANIA_00863
Aspergillus nidulans
CADANIAG00001795
I
CADAORAG00003101
Aspergillus oryzae
CADAORAG00003101
I
ATEG_00829
Aspergillus terreus
CADATEAG00009031
I
NFIA_010190
Neosartorya fischeri
CADNFIAG00001692
I
CCM_08972
Cordyceps militaris
CCM_08972
I
CFIO01_10160
Colletotrichum fioriniae
CFIO01_10160
I
CH063_11852
Colletotrichum higginsianum
CH063_11852
I
CHGG_10452
Chaetomium globosum
CHGG_10452
I
CMQ_6901
Grosmannia clavigera
CMQ_6901
I
Cob_04720
Colletotrichum orbiculare
Cob_04720
I
COCC4DRAFT_76368
Bipolaris maydis
COCC4DRAFT_76368
I
COCCADRAFT_110079
Bipolaris zeicola
COCCADRAFT_110079
I
COCMIDRAFT_109395
Bipolaris oryzae
COCMIDRAFT_109395
I
COCSADRAFT_165419
Bipolaris sorokiniana
COCSADRAFT_165419
I
COCVIDRAFT_107887
Bipolaris victoriae
COCVIDRAFT_107887
I
CPC735_009520
Coccidioides posadasii
CPC735_009520
I
CPUR_06638
Claviceps purpurea
CPUR_06638
I
CSUB01_09634
Colletotrichum sublineola
CSUB01_09634
I
CTHT_0015780
Chaetomium thermophilum
CTHT_0015780
I
DRE_03471
Drechslerella stenobrocha
DRE_03471
I
EPUS_02342
Endocarpon pusillum
EPUS_02342
I
EURHEDRAFT_374072
Aspergillus ruber
EURHEDRAFT_374072
I
F503_00341
Ophiostoma piceae uamh
F503_00341
I
FFUJ_01774
Fusarium fujikuroi
FFUJ_01774
I
FGRRES_01564
Fusarium graminearum
FGRRES_01564
I
FOXG_11142
Fusarium oxysporum
FOXG_11142
I
FPSE_00770
Fusarium pseudograminearum
FPSE_00770
I
G647_09514
Cladophialophora carrionii
G647_09514
I
GGTG_11131
Gaeumannomyces graminis
GGTG_11131
I
GLRG_09934
Colletotrichum graminicola
GLRG_09934
I
GMDG_03461
Pseudogymnoascus destructans
GMDG_03461
I
GSTUM_00004217001
Tuber melanosporum
GSTUM_00004217001
I
H072_5069
Dactylellina haptotyla
H072_5069
I
H101_05509
Trichophyton interdigitale
H101_05509
I
HMPREF1120_02454
Exophiala dermatitidis
HMPREF1120_02454
I
HMPREF1541_01212
Cyphellophora europaea
HMPREF1541_01212
I
HMPREF1624_07895
Sporothrix schenckii
HMPREF1624_07895
I
M437DRAFT_59322
Aureobasidium melanogenum
M437DRAFT_59322
I
M438DRAFT_273042
Aureobasidium pullulans
M438DRAFT_273042
I
MAC_05766
Metarhizium acridum
MAC_05766
I
MAJ_06040
Metarhizium majus
MAJ_06040
I
MAM_04090
Metarhizium album
MAM_04090
I
MANI_026774
Metarhizium anisopliae
MANI_026774
I
MAPG_00807
Magnaporthe poae
MAPG_00807
I
MBR_06802
Metarhizium brunneum
MBR_06802
I
MGU_04563
Metarhizium guizhouense
MGU_04563
I
MGYG_07011
Microsporum gypseum
MGYG_07011
I
MPH_10353
Macrophomina phaseolina
MPH_10353
I
MYCFIDRAFT_114915
Pseudocercospora fijiensis
MYCFIDRAFT_114915
I
Mycgr3G36968
Zymoseptoria tritici
Mycgr3G36968
I
MYCTH_2312847
Myceliophthora thermophila
MYCTH_2312847
I
NechaG89712
Fusarium solani
NechaG89712
I
NEUTE1DRAFT_65511
Neurospora tetrasperma
NEUTE1DRAFT_65511
I
OIDMADRAFT_170049
Oidiodendron maius
OIDMADRAFT_170049
I
PABG_02378
Paracoccidioides brasiliensis
PABG_02378
I
PCH_Pc06g01000
Penicillium rubens
PCH_Pc06g01000
I
PDE_00436
Penicillium oxalicum
PDE_00436
I
PDIP_05690
Penicillium digitatum
PDIP_05690
I
PEX1_049440
Penicillium expansum
PEX1_049440
I
PFICI_09104
Pestalotiopsis fici
PFICI_09104
I
PITC_097010
Penicillium italicum
PITC_097010
I
PMAA_073640
Talaromyces marneffei
PMAA_073640
I
PODANS_3_9460
Podospora anserina
PODANS_3_9460
I
PTRG_10536
Pyrenophora triticirepentis
PTRG_10536
I
PTT_08053
Pyrenophora teres
PTT_08053
I
PV04_05800
Capronia semiimmersa
PV04_05800
I
PV05_06488
Exophiala xenobiotica
PV05_06488
I
PV06_01794
Exophiala oligosperma
PV06_01794
I
PV07_04527
Cladophialophora immunda
PV07_04527
I
PV08_02614
Exophiala spinifera
PV08_02614
I
PV09_03993
Verruconis gallopava
PV09_03993
I
PV10_07375
Exophiala mesophila
PV10_07375
I
PV11_02510
Exophiala sideris
PV11_02510
I
S40285_07076
Stachybotrys chlorohalonata
S40285_07076
I
S40288_02059
Stachybotrys chartarum
S40288_02059
I
SEPMUDRAFT_39628
Sphaerulina musiva
SEPMUDRAFT_39628
I
SMAC_06786
Sordaria macrospora
SMAC_06786
I
SPBR_00049
Sporothrix brasiliensis
SPBR_00049
I
SS1G_00816
Sclerotinia sclerotiorum
SS1G_00816
I
TEQG_04963
Trichophyton equinum
TEQG_04963
I
TESG_04779
Trichophyton tonsurans
TESG_04779
I
THITE_75868
Thielavia terrestris
THITE_75868
I
TRIATDRAFT_141302
Trichoderma atroviride
TRIATDRAFT_141302
I
TRIREDRAFT_22535
Trichoderma reesei
TRIREDRAFT_22535
I
TRIVIDRAFT_65142
Trichoderma virens
TRIVIDRAFT_65142
I
TSTA_094090
Talaromyces stipitatus
TSTA_094090
I
U727_00432520171
Penicillium solitum
U727_00432520171
I
UV8b_462
Ustilaginoidea virens
UV8b_462
I
V499_01915
Pseudogymnoascus pannorum
V499_01915
I
VDAG_07729
Verticillium dahliae
VDAG_07729
I
VDBG_05795
Verticillium alfalfae
VDBG_05795
I
VHEMI05723
Torrubiella hemipterigena
VHEMI05723
I
X797_000021
Metarhizium robertsii
X797_000021
I
YALI0_E24277g
Yarrowia lipolytica
YALI0_E24277g
I
Z517_03954
Fonsecaea pedrosoi
Z517_03954
I
Z518_03644
Rhinocladiella mackenziei
Z518_03644
I
Z519_07440
Cladophialophora bantiana
Z519_07440
I
e_gw1.2.1218.1
Mycosphaerella graminicola
e_gw1.2.1218.1
I
estExt_fgenesh1_pg.C_140357
Mycosphaerella fijiensis
estExt_fgenesh1_pg.C_140357
I
estExt_fgenesh3_pm.C_110174
Neurospora discreta
estExt_fgenesh3_pm.C_110174
I
fgenesh1_pm.sca_8_chr1_1_0000149
Nectria haematococca
fgenesh1_pm.sca_8_chr1_1_0000149
I
e_gw1.2.1060.1
Cryphonectria parasitica
e_gw1.2.1060.1
I
fgenesh1_pg.00007_#_1
Aspergillus carbonarius
fgenesh1_pg.00007_#_1
I
Pc06g01000
Penicillium chrysogenum
Pc06g01000
I
PMAA_073640
Penicillium marneffei
PMAA_073640
I