Cagra.0026s0014 (Capsella grandiflora)
GATA

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00320 (GATA) IPR000679 Cagra.0026s0014 T196415_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
GATA1
M01998_2.00 		Arabidopsis thaliana
NNNVATBNNN
NNNVATBNNN		 PBM
Weirauch et al.(2014)
pTH8144 		0.856 0.972
GATA1
M06887_2.00 		Arabidopsis thaliana
RYGRTGRTGRTGRTG
CAYCAYCAYCAYCRY		 Dap-seq
OMalley et al.(2016)
GATA1_col_a 		0.856 0.972
GATA1
M06888_2.00 		Arabidopsis thaliana
HNYAGATCYRRWYB
VRWYYRGATCTRND		 Dap-seq
OMalley et al.(2016)
GATA1_colamp_a 		0.856 0.972
Q76DY3_TOBAC
M10600_2.00 		Nicotiana tabacum Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$AGP1_01 		0.847 0.861
GATA6
M01999_2.00 		Arabidopsis thaliana
NVRATVNDNN
NNHNBATYBN		 PBM
Weirauch et al.(2014)
pTH7317 		0.847 0.833
GATA6
M06890_2.00 		Arabidopsis thaliana
YAGATCTARAWNH
DNWTYTAGATCTR		 Dap-seq
OMalley et al.(2016)
GATA6_col200_a 		0.847 0.833
GATA4
M00727_2.00 		Arabidopsis thaliana
NNNGATCNNN
NNNGATCNNN		 PBM
Chang et al.(2013)
pTH7196 		0.837 0.861
GATA9
M02002_2.00 		Arabidopsis thaliana
NHAGATCTDNN
NNHAGATCTDN		 PBM
Weirauch et al.(2014)
pTH7378 		0.837 0.861
GATA4
M06891_2.00 		Arabidopsis thaliana
HNNYRGATCYRRWYY
RRWYYRGATCYRNND		 Dap-seq
OMalley et al.(2016)
GATA4_col_a 		0.837 0.861
GATA12
M00863_2.00 		Arabidopsis thaliana
NNNGATBN
NVATCNNN		 PBM
Franco-Zorrilla et al.(2014)
GATA12 		0.832 0.833
GATA12
M06895_2.00 		Arabidopsis thaliana
DWWYYAGATCYRR
YYRGATCTRRWWH		 Dap-seq
OMalley et al.(2016)
GATA12_col_a 		0.832 0.833
GATA12
M06896_2.00 		Arabidopsis thaliana
YRGATCTRRWYYNDN
NHNRRWYYAGATCYR		 Dap-seq
OMalley et al.(2016)
GATA12_colamp_a 		0.832 0.833
GATA8
M02000_2.00 		Arabidopsis thaliana
NNGATYYVN
NBRRATCNN		 PBM
Weirauch et al.(2014)
pTH7665 		0.832 0.806
GATA10
M01994_2.00 		Arabidopsis thaliana
CAGATCTA
TAGATCTG		 PBM
Weirauch et al.(2014)
pTH7615 		0.830 0.806
GATA11
M01995_2.00 		Arabidopsis thaliana
CAGATCTH
DAGATCTG		 PBM
Weirauch et al.(2014)
pTH7486 		0.830 0.806
GATA11
M06882_2.00 		Arabidopsis thaliana
HYYAGATCYRRWWHH
DDWWYYRGATCTRRD		 Dap-seq
OMalley et al.(2016)
GATA11_col_a 		0.830 0.806
GATA3
M02003_2.00 		Arabidopsis thaliana
NNNNGATBNN
NNVATCNNNN		 PBM
Weirauch et al.(2014)
pTH7657 		0.819 0.778
GATA7
M02004_2.00 		Arabidopsis thaliana
NNNNATNNNN
NNNNATNNNN		 PBM
Weirauch et al.(2014)
pTH7658 		0.819 0.778
For this family, TFs with SR scores > 0.802 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Cagra.0026s0014.1.p GATA 158 193

Links

Other GATA family TFs
Other Capsella grandiflora TFs

609 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
CIMG_04804 Coccidioides immitis CIMG_04804 N
MCYG_05945 Microsporum canis MCYG_05945 N
SNOG_13398 Stagonospora nodorum SNOG_13398 N
VDBG_09326 Verticillium albo atrum VDBG_09326 N
A1O1_04095 Capronia coronata A1O1_04095 N
A1O3_01321 Capronia epimyces A1O3_01321 N
A1O5_10088 Cladophialophora psammophila A1O5_10088 N
A1O7_05748 Cladophialophora yegresii A1O7_05748 N
A1O9_04250 Exophiala aquamarina A1O9_04250 N
AOL_s00097g46 Arthrobotrys oligospora AOL_s00097g46 N
ARB_04542 Arthroderma benhamiae ARB_04542 N
AUEXF2481DRAFT_27191 Aureobasidium subglaciale AUEXF2481DRAFT_27191 N
BAUCODRAFT_34049 Baudoinia compniacensis BAUCODRAFT_34049 N
BBA_07259 Beauveria bassiana BBA_07259 N
Bcin10g04400 Botrytis cinerea Bcin10g04400 N
BDDG_07653 Blastomyces dermatitidis BDDG_07653 N
BGHDH14_bgh02243 Blumeria graminis BGHDH14_bgh02243 N
CADAFLAG00000799 Aspergillus flavus CADAFLAG00000799 N
AFUA_1G03210 Aspergillus fumigatus CADAFUAG00009239 N
CADANGAG00000476 Aspergillus niger CADANGAG00000476 N
CADAORAG00002728 Aspergillus oryzae CADAORAG00002728 N
NFIA_021310 Neosartorya fischeri CADNFIAG00000827 N
CFIO01_13194 Colletotrichum fioriniae CFIO01_13194 N
CGGC5_975 Colletotrichum gloeosporioides CGGC5_975 N
CH063_12954 Colletotrichum higginsianum CH063_12954 N
Cob_01758 Colletotrichum orbiculare Cob_01758 N
COCC4DRAFT_54097 Bipolaris maydis COCC4DRAFT_54097 N
COCCADRAFT_88089 Bipolaris zeicola COCCADRAFT_88089 N
COCMIDRAFT_25841 Bipolaris oryzae COCMIDRAFT_25841 N
COCSADRAFT_221816 Bipolaris sorokiniana COCSADRAFT_221816 N
COCVIDRAFT_99762 Bipolaris victoriae COCVIDRAFT_99762 N
CPC735_070400 Coccidioides posadasii CPC735_070400 N
CSUB01_05390 Colletotrichum sublineola CSUB01_05390 N
DOTSEDRAFT_69606 Dothistroma septosporum DOTSEDRAFT_69606 N
EPUS_03928 Endocarpon pusillum EPUS_03928 N
EV44_g2178 Erysiphe necator EV44_g2178 N
FGRRES_01915 Fusarium graminearum FGRRES_01915 N
FOXG_04220 Fusarium oxysporum FOXG_04220 N
FOXG_14431 Fusarium oxysporum FOXG_14431 N
FOXG_15050 Fusarium oxysporum FOXG_15050 N
FPSE_09133 Fusarium pseudograminearum FPSE_09133 N
G647_06777 Cladophialophora carrionii G647_06777 N
GGTG_14195 Gaeumannomyces graminis GGTG_14195 N
GLRG_01306 Colletotrichum graminicola GLRG_01306 N
GMDG_02112 Pseudogymnoascus destructans GMDG_02112 N
GMDG_03182 Pseudogymnoascus destructans GMDG_03182 N
H072_5668 Dactylellina haptotyla H072_5668 N
H101_07912 Trichophyton interdigitale H101_07912 N
H102_02396 Trichophyton rubrum H102_02396 N
H105_02417 Trichophyton soudanense H105_02417 N
HCBG_00682 Histoplasma capsulatum HCBG_00682 N
HMPREF1120_08485 Exophiala dermatitidis HMPREF1120_08485 N
HMPREF1541_08408 Cyphellophora europaea HMPREF1541_08408 N
M437DRAFT_83846 Aureobasidium melanogenum M437DRAFT_83846 N
M438DRAFT_97521 Aureobasidium pullulans M438DRAFT_97521 N
MAC_06449 Metarhizium acridum MAC_06449 N
MAJ_03662 Metarhizium majus MAJ_03662 N
MANI_018332 Metarhizium anisopliae MANI_018332 N
MAPG_03921 Magnaporthe poae MAPG_03921 N
MBR_07492 Metarhizium brunneum MBR_07492 N
MCYG_05945 Arthroderma otae MCYG_05945 N
MGU_03784 Metarhizium guizhouense MGU_03784 N
MGYG_06020 Microsporum gypseum MGYG_06020 N
MYCFIDRAFT_39346 Pseudocercospora fijiensis MYCFIDRAFT_39346 N
NechaG50578 Fusarium solani NechaG50578 N
OCS_04024 Ophiocordyceps sinensis OCS_04024 N
OIDMADRAFT_141697 Oidiodendron maius OIDMADRAFT_141697 N
PAAG_05598 Paracoccidioides sp lutzii PAAG_05598 N
PABG_06170 Paracoccidioides brasiliensis PABG_06170 N
PCH_Pc13g03170 Penicillium rubens PCH_Pc13g03170 N
PDE_03008 Penicillium oxalicum PDE_03008 N
PDIP_83900 Penicillium digitatum PDIP_83900 N
PEX1_072030 Penicillium expansum PEX1_072030 N
PMAA_050990 Talaromyces marneffei PMAA_050990 N
PODANS_2_2600 Podospora anserina PODANS_2_2600 N
PTRG_05162 Pyrenophora triticirepentis PTRG_05162 N
PTT_11410 Pyrenophora teres PTT_11410 N
PV04_06122 Capronia semiimmersa PV04_06122 N
PV05_05003 Exophiala xenobiotica PV05_05003 N
PV06_00365 Exophiala oligosperma PV06_00365 N
PV07_03969 Cladophialophora immunda PV07_03969 N
PV08_04239 Exophiala spinifera PV08_04239 N
PVAR5_1147 Byssochlamys spectabilis PVAR5_1147 N
SBOR_10075 Sclerotinia borealis SBOR_10075 N
SEPMUDRAFT_147483 Sphaerulina musiva SEPMUDRAFT_147483 N
SETTUDRAFT_150444 Setosphaeria turcica SETTUDRAFT_150444 N
SNOG_13398 Phaeosphaeria nodorum SNOG_13398 N
SS1G_12488 Sclerotinia sclerotiorum SS1G_12488 N
TEQG_04364 Trichophyton equinum TEQG_04364 N
TESG_07658 Trichophyton tonsurans TESG_07658 N
TRV_02801 Trichophyton verrucosum TRV_02801 N
TSTA_021880 Talaromyces stipitatus TSTA_021880 N
U727_00430300601 Penicillium solitum U727_00430300601 N
UREG_06714 Uncinocarpus reesii UREG_06714 N
UV8b_1370 Ustilaginoidea virens UV8b_1370 N
V499_07080 Pseudogymnoascus pannorum V499_07080 N
VDAG_04562 Verticillium dahliae VDAG_04562 N
VDBG_09326 Verticillium alfalfae VDBG_09326 N
VHEMI10091 Torrubiella hemipterigena VHEMI10091 N
VHEMI10725 Torrubiella hemipterigena VHEMI10725 N
X797_003404 Metarhizium robertsii X797_003404 N
Z517_00692 Fonsecaea pedrosoi Z517_00692 N
Z519_04250 Cladophialophora bantiana Z519_04250 N
e_gw1.14.414.1 Mycosphaerella fijiensis e_gw1.14.414.1 N
e_gw1.14.618.1 Nectria haematococca e_gw1.14.618.1 N
estExt_fgenesh1_pm.C_250032 Cochliobolus heterostrophus C5 estExt_fgenesh1_pm.C_250032 N
AB06078.1 Alternaria brassicicola AB06078.1 N
fgenesh1_pm.00129_#_356 Aspergillus carbonarius fgenesh1_pm.00129_#_356 N
Pc13g03170 Penicillium chrysogenum Pc13g03170 N
PMAA_050990 Penicillium marneffei PMAA_050990 N