Carubv10007115m.g (Capsella rubella)
GATA

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00320 (GATA) IPR000679 Carubv10007115m.g T196452_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
GATA26
M02001_2.00 		Arabidopsis thaliana
NNKATBNNNN
NNNNVATMNN		 PBM
Weirauch et al.(2014)
pTH7490 		0.867 1.000
GATA27
M02005_2.00 		Arabidopsis thaliana
NNGATBNNN
NNNVATCNN		 PBM
Weirauch et al.(2014)
pTH7492 		0.867 0.944
For this family, TFs with SR scores > 0.802 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Carubv10007115m GATA 7 42

Links

Other GATA family TFs
Other Capsella rubella TFs

69 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
br Drosophila melanogaster FBgn0000210 D
AMEC016444 Anopheles melas AMEC016444 N
LDEC009788 Leptinotarsa decemlineata LDEC009788 N
AARA006779 Anopheles arabiensis AARA006779 N
ACOM042123 Anopheles coluzzii ACOM042123 N
ADIR009008 Anopheles dirus ADIR009008 N
AEPI002763 Anopheles epiroticus AEPI002763 N
AFAF016384 Anopheles farauti AFAF016384 N
AFUN005064 Anopheles funestus AFUN005064 N
AMAM014509 Anopheles maculatus AMAM014509 N
LCUP011136 Lucilia cuprina LCUP011136 N
AMEM001056 Anopheles merus AMEM001056 N
AMIN003105 Anopheles minimus AMIN003105 N
AQUA008618 Anopheles quadriannulatus AQUA008618 N
LLOJ000809 Lutzomyia longipalpis LLOJ000809 N
MDOA002234 Musca domestica MDOA002234 N
PPAI010690 Phlebotomus papatasi PPAI010690 N
CpipJ_CPIJ003271 Culex pipiens CpipJ_CPIJ003271 N
Hsal_01159--NP_001035356.1_APIME Harpegnathos saltator Hsal_01159--NP_001035356.1_APIME N
Cflo_02156--NP_001035356.1_APIME Camponotus floridanus Cflo_02156--NP_001035356.1_APIME N
TC005476 Tribolium castaneum TC005476 N
SINV21863 Solenopsis invicta SINV21863 N
NV15003 Nasonia vitripennis NV15003 N
KGM_00053 Danaus plexippus KGM_00053 N
GB48273 Apis mellifera GB48273 N
GE16700 Drosophila yakuba FBgn0234197 N
GI16494 Drosophila mojavensis FBgn0139242 N
CPIJ003271 Culex quinquefasciatus CPIJ003271 N
BGIBMGA009909 Bombyx mori BGIBMGA009909 N
AGAP002163 Anopheles gambiae AGAP002163 N
ADAC009993 Anopheles darlingi ADAC009993 N
ACEP24929 Atta cephalotes ACEP24929 N