Carubv10017765m.g (Capsella rubella)
GATA

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00320 (GATA) IPR000679 Carubv10017765m.g T196464_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
GATA19
M06893_2.00 		Arabidopsis thaliana
BNGATCBGATY
RATCVGATCNV		 Dap-seq
OMalley et al.(2016)
GATA19_col_a 		0.867 1.000
GATA19
M06894_2.00 		Arabidopsis thaliana
HNGATCBGATY
RATCVGATCND		 Dap-seq
OMalley et al.(2016)
GATA19_colamp_a 		0.867 1.000
GATA20
M06884_2.00 		Arabidopsis thaliana
GATCBGAT
ATCVGATC		 Dap-seq
OMalley et al.(2016)
GATA20_col_a 		0.825 0.944
GATA20
M06885_2.00 		Arabidopsis thaliana
HNGATCNGATBND
HNVATCNGATCND		 Dap-seq
OMalley et al.(2016)
GATA20_colamp_a 		0.825 0.944
For this family, TFs with SR scores > 0.802 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Carubv10017765m GATA 150 185

Links

Other GATA family TFs
Other Capsella rubella TFs

132 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
PEX1_089410 Penicillium expansum PEX1_089410 N
PVAR5_5058 Byssochlamys spectabilis PVAR5_5058 N
PV11_09323 Exophiala sideris PV11_09323 N
PV10_02096 Exophiala mesophila PV10_02096 N
PV08_09594 Exophiala spinifera PV08_09594 N
PV07_09526 Cladophialophora immunda PV07_09526 N
PV06_05828 Exophiala oligosperma PV06_05828 N
PV05_09469 Exophiala xenobiotica PV05_09469 N
PMAA_094090 Talaromyces marneffei PMAA_094090 N
PITC_006180 Penicillium italicum PITC_006180 N
PFICI_11537 Pestalotiopsis fici PFICI_11537 N
S40285_00177 Stachybotrys chlorohalonata S40285_00177 N
PDIP_12360 Penicillium digitatum PDIP_12360 N
PDE_03679 Penicillium oxalicum PDE_03679 N
PCH_Pc22g18960 Penicillium rubens PCH_Pc22g18960 N
OIDMADRAFT_143331 Oidiodendron maius OIDMADRAFT_143331 N
OCS_05069 Ophiocordyceps sinensis OCS_05069 N
NechaG95544 Fusarium solani NechaG95544 N
MGU_03961 Metarhizium guizhouense MGU_03961 N
MBR_07690 Metarhizium brunneum MBR_07690 N
MAPG_08031 Magnaporthe poae MAPG_08031 N
VDBG_06863 Verticillium alfalfae VDBG_06863 N
PMAA_094090 Penicillium marneffei PMAA_094090 N
Pc22g18960 Penicillium chrysogenum Pc22g18960 N
e_gw1.00609.14.1 Aspergillus carbonarius e_gw1.00609.14.1 N
fgenesh1_pm.sca_10_chr8_2_0000183 Nectria haematococca fgenesh1_pm.sca_10_chr8_2_0000183 N
Z519_04474 Cladophialophora bantiana Z519_04474 N
Z518_04555 Rhinocladiella mackenziei Z518_04555 N
Z517_02112 Fonsecaea pedrosoi Z517_02112 N
X797_003194 Metarhizium robertsii X797_003194 N
VHEMI08803 Torrubiella hemipterigena VHEMI08803 N
MANI_110882 Metarhizium anisopliae MANI_110882 N
VDAG_05926 Verticillium dahliae VDAG_05926 N
V499_07367 Pseudogymnoascus pannorum V499_07367 N
UV8b_1287 Ustilaginoidea virens UV8b_1287 N
U727_00430090181 Penicillium solitum U727_00430090181 N
TSTA_047120 Talaromyces stipitatus TSTA_047120 N
TRIVIDRAFT_43538 Trichoderma virens TRIVIDRAFT_43538 N
TRIATDRAFT_283367 Trichoderma atroviride TRIATDRAFT_283367 N
SBOR_5966 Sclerotinia borealis SBOR_5966 N
S40288_02857 Stachybotrys chartarum S40288_02857 N
CADAFLAG00004963 Aspergillus flavus CADAFLAG00004963 N
CH063_07253 Colletotrichum higginsianum CH063_07253 N
CGGC5_504 Colletotrichum gloeosporioides CGGC5_504 N
CFIO01_10218 Colletotrichum fioriniae CFIO01_10218 N
NFIA_108640 Neosartorya fischeri CADNFIAG00010194 N
ATEG_05447 Aspergillus terreus CADATEAG00003680 N
CADAORAG00007908 Aspergillus oryzae CADAORAG00007908 N
ANIA_04472 Aspergillus nidulans CADANIAG00005974 N
CADANGAG00003904 Aspergillus niger CADANGAG00003904 N
AFUA_4G07560 Aspergillus fumigatus CADAFUAG00008022 N
Cob_10011 Colletotrichum orbiculare Cob_10011 N
ACLA_046870 Aspergillus clavatus CADACLAG00004684 N
BGHDH14_bgh06615 Blumeria graminis BGHDH14_bgh06615 N
BBA_02247 Beauveria bassiana BBA_02247 N
A1O9_00929 Exophiala aquamarina A1O9_00929 N
A1O7_01784 Cladophialophora yegresii A1O7_01784 N
A1O5_12280 Cladophialophora psammophila A1O5_12280 N
A1O3_08861 Capronia epimyces A1O3_08861 N
A1O1_01341 Capronia coronata A1O1_01341 N
VDBG_06863 Verticillium albo atrum VDBG_06863 N
FVEG_07013 Fusarium verticillioides FVEG_07013 N
MAM_01486 Metarhizium album MAM_01486 N
MAC_02538 Metarhizium acridum MAC_02538 N
M7I_2968 Glarea lozoyensis M7I_2968 N
HMPREF1541_06366 Cyphellophora europaea HMPREF1541_06366 N
HMPREF1120_00355 Exophiala dermatitidis HMPREF1120_00355 N
GMDG_05133 Pseudogymnoascus destructans GMDG_05133 N
GLRG_00137 Colletotrichum graminicola GLRG_00137 N
GGTG_08239 Gaeumannomyces graminis GGTG_08239 N
G647_10033 Cladophialophora carrionii G647_10033 N
CIMG_09550 Coccidioides immitis CIMG_09550 N
FPSE_05177 Fusarium pseudograminearum FPSE_05177 N
FGRRES_05512 Fusarium graminearum FGRRES_05512 N
FFUJ_08647 Fusarium fujikuroi FFUJ_08647 N
EV44_g2608 Erysiphe necator EV44_g2608 N
EURHEDRAFT_412596 Aspergillus ruber EURHEDRAFT_412596 N
EPUS_00195 Endocarpon pusillum EPUS_00195 N
CSUB01_06218 Colletotrichum sublineola CSUB01_06218 N
CPUR_05002 Claviceps purpurea CPUR_05002 N
CPC735_018970 Coccidioides posadasii CPC735_018970 N