gene27406-v1.0-hybrid (Fragaria vesca)
GATA

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00320 (GATA) IPR000679 gene27406-v1.0-hybrid T196578_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
mrna27406.1-v1.0-hybrid GATA 166 203

Links

Other GATA family TFs
Other Fragaria vesca TFs

27 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
OPUNC03G30420 Oryza punctata OPUNC03G30420 N 0.811
chr4.CM0100.130.nc Lotus japonicus chr4.CM0100.130.nc N 0.837
PK04189.1 Cannabis sativa PK04189.1 N 0.837
Pavir.J00664 Panicum virgatum Pavir.J00664 N 0.811
Pavir.Ia00665 Panicum virgatum Pavir.Ia00665 N 0.811
evm.TU.supercontig_20.16 Carica papaya evm.TU.supercontig_20.16 N 0.837
Pm022161 Prunus mume Pm022161 N 0.842
Ca_05292 Cicer arietinum Ca_05292 N 0.837
Si036747m.g Setaria italica Si036747m.g N 0.811
Sb01g008950 Sorghum bicolor Sb01g008950 N 0.810
PRUPE_ppa023830mg Prunus persica PRUPE_ppa023830mg N 0.842
GATA19 Oryza sativa OS03G0734900 N 0.811
ORUFI03G34610 Oryza rufipogon ORUFI03G34610 N 0.811
ORGLA03G0301600 Oryza glaberrima ORGLA03G0301600 N 0.811
GATA19 Oryza indica BGIOSGA009856 N 0.811
ONIVA03G34920 Oryza nivara ONIVA03G34920 N 0.811
OMERI03G29830 Oryza meridionalis OMERI03G29830 N 0.811
OLONG_026796 Oryza longistaminata OLONG_026796 N 0.811
OGLUM03G32890 Oryza glumaepatula OGLUM03G32890 N 0.811
OBART03G33220 Oryza barthii OBART03G33220 N 0.811
OB03G40300 Oryza brachyantha OB03G40300 N 0.811
GSMUA_Achr7G01650_001 Musa acuminata GSMUA_Achr7G01650_001 N 0.811
GSMUA_Achr6G04510_001 Musa acuminata GSMUA_Achr6G04510_001 N 0.811
GRMZM2G065896 Zea mays GRMZM2G065896 N 0.811
GLYMA08G07170 Glycine max GLYMA08G07170 N 0.842
GLYMA07G30140 Glycine max GLYMA07G30140 N 0.842
BRADI1G09550 Brachypodium distachyon BRADI1G09550 N 0.811