Lus10011010.g (Linum usitatissimum)
GATA

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00320 (GATA) IPR000679 Lus10011010.g T196631_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
GATA26
M02001_2.00 		Arabidopsis thaliana
NNKATBNNNN
NNNNVATMNN		 PBM
Weirauch et al.(2014)
pTH7490 		0.867 0.972
GATA27
M02005_2.00 		Arabidopsis thaliana
NNGATBNNN
NNNVATCNN		 PBM
Weirauch et al.(2014)
pTH7492 		0.867 0.972
For this family, TFs with SR scores > 0.802 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Lus10011010 GATA 7 42

Links

Other GATA family TFs
Other Linum usitatissimum TFs

69 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ACLA_043080 Aspergillus clavatus CADACLAG00004167 N 0.000
ATEG_03710 Aspergillus terreus CADATEAG00009650 N 0.000
NFIA_096350 Neosartorya fischeri CADNFIAG00009280 N 0.000
CCM_03473 Cordyceps militaris CCM_03473 N 0.000
COCC4DRAFT_84362 Bipolaris maydis COCC4DRAFT_84362 N 0.000
COCMIDRAFT_107095 Bipolaris oryzae COCMIDRAFT_107095 N 0.000
COCSADRAFT_178261 Bipolaris sorokiniana COCSADRAFT_178261 N 0.000
FFUJ_08022 Fusarium fujikuroi FFUJ_08022 N 0.000
FOXG_10665 Fusarium oxysporum FOXG_10665 N 0.000
MGYG_04676 Microsporum gypseum MGYG_04676 N 0.000
OIDMADRAFT_170239 Oidiodendron maius OIDMADRAFT_170239 N 0.000
OIDMADRAFT_180554 Oidiodendron maius OIDMADRAFT_180554 N 0.000