Lus10016092.g (Linum usitatissimum)
GATA

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00320 (GATA) IPR000679 Lus10016092.g T196634_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
GATA8
M02000_2.00 		Arabidopsis thaliana
NNGATYYVN
NBRRATCNN		 PBM
Weirauch et al.(2014)
pTH7665 		0.839 0.833
GATA11
M01995_2.00 		Arabidopsis thaliana
CAGATCTH
DAGATCTG		 PBM
Weirauch et al.(2014)
pTH7486 		0.838 0.806
GATA11
M06882_2.00 		Arabidopsis thaliana
HYYAGATCYRRWWHH
DDWWYYRGATCTRRD		 Dap-seq
OMalley et al.(2016)
GATA11_col_a 		0.838 0.806
Q76DY3_TOBAC
M10600_2.00 		Nicotiana tabacum Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$AGP1_01 		0.834 0.806
GATA9
M02002_2.00 		Arabidopsis thaliana
NHAGATCTDNN
NNHAGATCTDN		 PBM
Weirauch et al.(2014)
pTH7378 		0.830 0.750
GATA12
M00863_2.00 		Arabidopsis thaliana
NNNGATBN
NVATCNNN		 PBM
Franco-Zorrilla et al.(2014)
GATA12 		0.830 0.750
GATA12
M06895_2.00 		Arabidopsis thaliana
DWWYYAGATCYRR
YYRGATCTRRWWH		 Dap-seq
OMalley et al.(2016)
GATA12_col_a 		0.830 0.750
GATA12
M06896_2.00 		Arabidopsis thaliana
YRGATCTRRWYYNDN
NHNRRWYYAGATCYR		 Dap-seq
OMalley et al.(2016)
GATA12_colamp_a 		0.830 0.750
GATA7
M02004_2.00 		Arabidopsis thaliana
NNNNATNNNN
NNNNATNNNN		 PBM
Weirauch et al.(2014)
pTH7658 		0.823 0.778
GATA6
M01999_2.00 		Arabidopsis thaliana
NVRATVNDNN
NNHNBATYBN		 PBM
Weirauch et al.(2014)
pTH7317 		0.823 0.750
GATA6
M06890_2.00 		Arabidopsis thaliana
YAGATCTARAWNH
DNWTYTAGATCTR		 Dap-seq
OMalley et al.(2016)
GATA6_col200_a 		0.823 0.750
GATA3
M02003_2.00 		Arabidopsis thaliana
NNNNGATBNN
NNVATCNNNN		 PBM
Weirauch et al.(2014)
pTH7657 		0.819 0.778
GATA1
M01998_2.00 		Arabidopsis thaliana
NNNVATBNNN
NNNVATBNNN		 PBM
Weirauch et al.(2014)
pTH8144 		0.819 0.750
GATA1
M06887_2.00 		Arabidopsis thaliana
RYGRTGRTGRTGRTG
CAYCAYCAYCAYCRY		 Dap-seq
OMalley et al.(2016)
GATA1_col_a 		0.819 0.750
GATA1
M06888_2.00 		Arabidopsis thaliana
HNYAGATCYRRWYB
VRWYYRGATCTRND		 Dap-seq
OMalley et al.(2016)
GATA1_colamp_a 		0.819 0.750
GATA10
M01994_2.00 		Arabidopsis thaliana
CAGATCTA
TAGATCTG		 PBM
Weirauch et al.(2014)
pTH7615 		0.819 0.722
GATA4
M00727_2.00 		Arabidopsis thaliana
NNNGATCNNN
NNNGATCNNN		 PBM
Chang et al.(2013)
pTH7196 		0.819 0.722
GATA4
M06891_2.00 		Arabidopsis thaliana
HNNYRGATCYRRWYY
RRWYYRGATCYRNND		 Dap-seq
OMalley et al.(2016)
GATA4_col_a 		0.819 0.722
For this family, TFs with SR scores > 0.802 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Lus10016092 GATA 181 216

Links

Other GATA family TFs
Other Linum usitatissimum TFs

603 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
NCU02307 Neurospora crassa NCU02307 D
MYCFIDRAFT_204155 Pseudocercospora fijiensis MYCFIDRAFT_204155 I
GGTG_02446 Gaeumannomyces graminis GGTG_02446 I
GLRG_09279 Colletotrichum graminicola GLRG_09279 I
GMDG_05510 Pseudogymnoascus destructans GMDG_05510 I
UV8b_6210 Ustilaginoidea virens UV8b_6210 I
UCRPA7_5598 Togninia minima UCRPA7_5598 I
HMPREF1624_04642 Sporothrix schenckii HMPREF1624_04642 I
M7I_1858 Glarea lozoyensis M7I_1858 I
MANI_011716 Metarhizium anisopliae MANI_011716 I
MAPG_09501 Magnaporthe poae MAPG_09501 I
MBR_04909 Metarhizium brunneum MBR_04909 I
TRIVIDRAFT_114564 Trichoderma virens TRIVIDRAFT_114564 I
MGU_01761 Metarhizium guizhouense MGU_01761 I
TRIREDRAFT_51907 Trichoderma reesei TRIREDRAFT_51907 I
TRIATDRAFT_37495 Trichoderma atroviride TRIATDRAFT_37495 I
GMDG_06850 Pseudogymnoascus destructans GMDG_06850 I
Mycgr3G109947 Zymoseptoria tritici Mycgr3G109947 I
MYCTH_2308823 Myceliophthora thermophila MYCTH_2308823 I
NechaG93341 Fusarium solani NechaG93341 I
NEUTE1DRAFT_124026 Neurospora tetrasperma NEUTE1DRAFT_124026 I
OCS_02179 Ophiocordyceps sinensis OCS_02179 I
THITE_2050890 Thielavia terrestris THITE_2050890 I
SMAC_09353 Sordaria macrospora SMAC_09353 I
PFICI_14476 Pestalotiopsis fici PFICI_14476 I
SBOR_8128 Sclerotinia borealis SBOR_8128 I
SAPIO_CDS3835 Scedosporium apiospermum SAPIO_CDS3835 I
PODANS_5_9700 Podospora anserina PODANS_5_9700 I
S40288_04125 Stachybotrys chartarum S40288_04125 I
S40285_04496 Stachybotrys chlorohalonata S40285_04496 I
FGRRES_17514 Fusarium graminearum FGRRES_17514 I
ACRE_009170 Acremonium chrysogenum ACRE_009170 I
BAUCODRAFT_70890 Baudoinia compniacensis BAUCODRAFT_70890 I
BBA_00740 Beauveria bassiana BBA_00740 I
Bcin02g05460 Botrytis cinerea Bcin02g05460 I
e_gw1.8.145.1 Cryphonectria parasitica e_gw1.8.145.1 I
fgenesh1_pm.sca_12_chr5_2_0000158 Nectria haematococca fgenesh1_pm.sca_12_chr5_2_0000158 I
estExt_Genewise1Plus.C_90712 Neurospora discreta estExt_Genewise1Plus.C_90712 I
estExt_Genewise1Plus.C_13865 Mycosphaerella fijiensis estExt_Genewise1Plus.C_13865 I
estExt_fgenesh1_pg.C_chr_60424 Mycosphaerella graminicola estExt_fgenesh1_pg.C_chr_60424 I
X797_001395 Metarhizium robertsii X797_001395 I
CCM_05966 Cordyceps militaris CCM_05966 I
CFIO01_08325 Colletotrichum fioriniae CFIO01_08325 I
CGGC5_10678 Colletotrichum gloeosporioides CGGC5_10678 I
CH063_10224 Colletotrichum higginsianum CH063_10224 I
CHGG_09596 Chaetomium globosum CHGG_09596 I
CMQ_3768 Grosmannia clavigera CMQ_3768 I
Cob_01903 Colletotrichum orbiculare Cob_01903 I
VDAG_09925 Verticillium dahliae VDAG_09925 I
FPSE_08858 Fusarium pseudograminearum FPSE_08858 I
CSUB01_08919 Colletotrichum sublineola CSUB01_08919 I
FFUJ_08392 Fusarium fujikuroi FFUJ_08392 I
DOTSEDRAFT_54819 Dothistroma septosporum DOTSEDRAFT_54819 I
F503_03706 Ophiostoma piceae uamh F503_03706 I
PMAA_045840 Penicillium marneffei PMAA_045840 N
Pc12g15860 Penicillium chrysogenum Pc12g15860 N
MGYG_00581 Microsporum gypseum MGYG_00581 N
fgenesh1_pm.00168_#_210 Aspergillus carbonarius fgenesh1_pm.00168_#_210 N
TEQG_00925 Trichophyton equinum TEQG_00925 N
TESG_06256 Trichophyton tonsurans TESG_06256 N
UREG_06856 Uncinocarpus reesii UREG_06856 N
UCRNP2_2614 Neofusicoccum parvum UCRNP2_2614 N
U727_00431251121 Penicillium solitum U727_00431251121 N
TSTA_035080 Talaromyces stipitatus TSTA_035080 N
W97_03128 Coniosporium apollinis W97_03128 N
TRV_03240 Trichophyton verrucosum TRV_03240 N
H101_05235 Trichophyton interdigitale H101_05235 N
MCYG_03418 Microsporum canis MCYG_03418 N
ARB_01185 Arthroderma benhamiae ARB_01185 N
BDDG_03436 Blastomyces dermatitidis BDDG_03436 N
ACLA_037430 Aspergillus clavatus CADACLAG00003256 N
CADAFLAG00001296 Aspergillus flavus CADAFLAG00001296 N
AFUA_3G09670 Aspergillus fumigatus CADAFUAG00004963 N
CADANGAG00012801 Aspergillus niger CADANGAG00012801 N
ANIA_03075 Aspergillus nidulans CADANIAG00010003 N
CADAORAG00003168 Aspergillus oryzae CADAORAG00003168 N
ATEG_04481 Aspergillus terreus CADATEAG00009053 N
NFIA_067630 Neosartorya fischeri CADNFIAG00006385 N
CPC735_046040 Coccidioides posadasii CPC735_046040 N
GSTUM_00003233001 Tuber melanosporum GSTUM_00003233001 N
GSTUM_00008124001 Tuber melanosporum GSTUM_00008124001 N
PVAR5_5474 Byssochlamys spectabilis PVAR5_5474 N
H102_08372 Trichophyton rubrum H102_08372 N
H105_08399 Trichophyton soudanense H105_08399 N
HCBG_02521 Histoplasma capsulatum HCBG_02521 N
MBM_07119 Marssonina brunnea MBM_07119 N
MCYG_03418 Arthroderma otae MCYG_03418 N
CIMG_01913 Coccidioides immitis CIMG_01913 N
MPH_00135 Macrophomina phaseolina MPH_00135 N
PCH_Pc12g15860 Penicillium rubens PCH_Pc12g15860 N
PDE_04982 Penicillium oxalicum PDE_04982 N
PDIP_76170 Penicillium digitatum PDIP_76170 N
PEX1_096620 Penicillium expansum PEX1_096620 N
PITC_015280 Penicillium italicum PITC_015280 N
PMAA_045840 Talaromyces marneffei PMAA_045840 N
PV04_04067 Capronia semiimmersa PV04_04067 N