Lus10016849.g (Linum usitatissimum)
GATA

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00320 (GATA) IPR000679 Lus10016849.g T196635_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
GATA16
M06897_2.00 		Arabidopsis thaliana
ATGATGATGATSATGATGATGATSATG
CATSATCATCATCATSATCATCATCAT		 Dap-seq
OMalley et al.(2016)
GATA16_col_a 		0.842 0.917
GATA15
M01997_2.00 		Arabidopsis thaliana
NNHGATCNN
NNGATCDNN		 PBM
Weirauch et al.(2014)
pTH7662 		0.822 0.917
GATA15
M06886_2.00 		Arabidopsis thaliana
GATGATGATGATGATGATS
SATCATCATCATCATCATC		 Dap-seq
OMalley et al.(2016)
GATA15_col_b 		0.822 0.917
For this family, TFs with SR scores > 0.802 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Lus10016849 GATA 28 63

Links

Other GATA family TFs
Other Linum usitatissimum TFs

143 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
NCU01386 Neurospora crassa NCU01386 D 0.000
ACRE_080110 Acremonium chrysogenum ACRE_080110 I 0.000
MGG_08185 Magnaporthe oryzae MGG_08185 I 0.000
MGU_05879 Metarhizium guizhouense MGU_05879 I 0.000
MYCTH_2300984 Myceliophthora thermophila MYCTH_2300984 I 0.000
NechaG71721 Fusarium solani NechaG71721 I 0.000
NEUTE1DRAFT_119830 Neurospora tetrasperma NEUTE1DRAFT_119830 I 0.000
OCS_04243 Ophiocordyceps sinensis OCS_04243 I 0.000
PFICI_07768 Pestalotiopsis fici PFICI_07768 I 0.000
S40285_07444 Stachybotrys chlorohalonata S40285_07444 I 0.000
S40288_01221 Stachybotrys chartarum S40288_01221 I 0.000
SBOR_3407 Sclerotinia borealis SBOR_3407 I 0.000
SMAC_08362 Sordaria macrospora SMAC_08362 I 0.000
SPBR_06705 Sporothrix brasiliensis SPBR_06705 I 0.000
SS1G_01733 Sclerotinia sclerotiorum SS1G_01733 I 0.000
TRIATDRAFT_53110 Trichoderma atroviride TRIATDRAFT_53110 I 0.000
UV8b_2421 Ustilaginoidea virens UV8b_2421 I 0.000
V499_06325 Pseudogymnoascus pannorum V499_06325 I 0.000
VDAG_08406 Verticillium dahliae VDAG_08406 I 0.000
VHEMI01378 Torrubiella hemipterigena VHEMI01378 I 0.000
X797_010922 Metarhizium robertsii X797_010922 I 0.000
X797_011329 Metarhizium robertsii X797_011329 I 0.000
X797_012204 Metarhizium robertsii X797_012204 I 0.000
estExt_fgenesh2_pg.C_10626 Neurospora discreta estExt_fgenesh2_pg.C_10626 I 0.000
estExt_Genewise1Plus.C_sca_6_chr9_2_00224 Nectria haematococca estExt_Genewise1Plus.C_sca_6_chr9_2_00224 I 0.000
FFUJ_02554 Fusarium fujikuroi FFUJ_02554 I 0.000
BBA_00844 Beauveria bassiana BBA_00844 I 0.000
Bcin02g03240 Botrytis cinerea Bcin02g03240 I 0.000
BGHDH14_bgh06583 Blumeria graminis BGHDH14_bgh06583 I 0.000
CFIO01_02423 Colletotrichum fioriniae CFIO01_02423 I 0.000
CH063_08904 Colletotrichum higginsianum CH063_08904 I 0.000
CHGG_02493 Chaetomium globosum CHGG_02493 I 0.000
CMQ_6262 Grosmannia clavigera CMQ_6262 I 0.000
Cob_03179 Colletotrichum orbiculare Cob_03179 I 0.000
CPUR_06716 Claviceps purpurea CPUR_06716 I 0.000
CSUB01_04857 Colletotrichum sublineola CSUB01_04857 I 0.000
F503_08286 Ophiostoma piceae uamh F503_08286 I 0.000
MBR_03822 Metarhizium brunneum MBR_03822 I 0.000
FGRRES_07368 Fusarium graminearum FGRRES_07368 I 0.000
FOXG_01519 Fusarium oxysporum FOXG_01519 I 0.000
FOXG_16654 Fusarium oxysporum FOXG_16654 I 0.000
FOXG_16719 Fusarium oxysporum FOXG_16719 I 0.000
FPSE_04183 Fusarium pseudograminearum FPSE_04183 I 0.000
FVEG_07882 Fusarium verticillioides FVEG_07882 I 0.000
GLRG_03014 Colletotrichum graminicola GLRG_03014 I 0.000
GMDG_03522 Pseudogymnoascus destructans GMDG_03522 I 0.000
HMPREF1624_00394 Sporothrix schenckii HMPREF1624_00394 I 0.000
MAJ_01995 Metarhizium majus MAJ_01995 I 0.000
MAM_07515 Metarhizium album MAM_07515 I 0.000
MANI_016433 Metarhizium anisopliae MANI_016433 I 0.000
TRIREDRAFT_123881 Trichoderma reesei TRIREDRAFT_123881 N 0.000
TRIVIDRAFT_33856 Trichoderma virens TRIVIDRAFT_33856 N 0.000
PODANS_2_9090 Podospora anserina PODANS_2_9090 N 0.000