CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Thhalv10000871m.g
(
Eutrema salsugineum
)
GATA
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00320 (GATA)
IPR000679
Thhalv10000871m.g
T196817_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
GATA26
M02001_2.00
Arabidopsis thaliana
NNKATBNNNN
NNNNVATMNN
PBM
Weirauch et al.(2014)
pTH7490
0.867
0.972
GATA27
M02005_2.00
Arabidopsis thaliana
NNGATBNNN
NNNVATCNN
PBM
Weirauch et al.(2014)
pTH7492
0.867
0.972
For this family, TFs with SR scores >
0.802
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Thhalv10000871m
GATA
7
42
CYHCGVTSTPLWRNGPPEKPVLCNACGSRWRTKGTL
Links
Other
GATA
family TFs
Other
Eutrema salsugineum
TFs
69 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ZNF436
Homo sapiens
ENSG00000125945
D
ZNF436
Pteropus vampyrus
ENSPVAG00000014803
I
ENSNLEG00000008477
Nomascus leucogenys
ENSNLEG00000008477
I
ENSOARG00000007586
Ovis aries
ENSOARG00000007586
I
ZNF436
Oryctolagus cuniculus
ENSOCUG00000010670
I
ZNF436
Otolemur garnettii
ENSOGAG00000009181
I
ZNF436
Ochotona princeps
ENSOPRG00000012417
I
ENSPANG00000018160
Papio anubis
ENSPANG00000018160
I
ZNF436
Procavia capensis
ENSPCAG00000010535
I
ENSPPYG00000001743
Pongo abelii
ENSPPYG00000001743
I
ZNF436
Pan troglodytes
ENSPTRG00000000325
I
Zfp46
Mus musculus
ENSMUSG00000051351
I
Zfp46
Rattus norvegicus
ENSRNOG00000049975
I
ZNF436
Sorex araneus
ENSSARG00000012155
I
ENSSSCG00000023614
Sus scrofa
ENSSSCG00000023614
I
ENSSTOG00000001212
Ictidomys tridecemlineatus
ENSSTOG00000001212
I
ZNF436
Tupaia belangeri
ENSTBEG00000002827
I
ZNF436
Tursiops truncatus
ENSTTRG00000007756
I
ZNF436
Vicugna pacos
ENSVPAG00000006412
I
ENSP00000324064-D75
Bos grunniens
ENSP00000324064-D75
I
Myotis_brandtii_ZNF436_10029737
Myotis brandtii
Myotis_brandtii_ZNF436_10029737
I
ZNF436
Felis catus
ENSFCAG00000030008
I
ZNF436
Bos taurus
ENSBTAG00000002594
I
ZNF436
Canis familiaris
ENSCAFG00000031798
I
ZNF436
Choloepus hoffmanni
ENSCHOG00000005098
I
ZNF436
Callithrix jacchus
ENSCJAG00000005489
I
ENSCSAG00000000923
Chlorocebus sabaeus
ENSCSAG00000000923
I
ZNF436
Dasypus novemcinctus
ENSDNOG00000015883
I
Zfp46
Dipodomys ordii
ENSDORG00000007438
I
ZNF436
Equus caballus
ENSECAG00000011988
I
ZNF436
Erinaceus europaeus
ENSEEUG00000005276
I
ENSAMEG00000009576
Ailuropoda melanoleuca
ENSAMEG00000009576
I
ZNF436
Gorilla gorilla
ENSGGOG00000011273
I
ZNF436
Loxodonta africana
ENSLAFG00000012795
I
ENSMEUG00000013368
Macropus eugenii
ENSMEUG00000013368
I
ZNF436
Microcebus murinus
ENSMICG00000005876
I
ZNF436
Myotis lucifugus
ENSMLUG00000007596
I
ZNF436
Macaca mulatta
ENSMMUG00000010973
I
ZNF436
Monodelphis domestica
ENSMODG00000016145
I
ENSMPUG00000015896
Mustela putorius furo
ENSMPUG00000015896
I