CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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14781_YLR013W
(
Saccharomyces paradoxus
)
GATA
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00320 (GATA)
IPR000679
14781_YLR013W
T197005_2.00
Superfamily (2010-Oct-26)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
GAT3
M00053_2.00
Saccharomyces cerevisiae
NDAGWTYNNN
NNNRAWCTHN
PBM
Badis et al.(2008)
GAT3_2122
0.862
0.944
GAT3
M01549_2.00
Saccharomyces cerevisiae
NDAGWTYNNN
NNNRAWCTHN
PBM
Zhu et al.(2009)
Gat3
0.862
0.944
GAT3
M07482_2.00
Saccharomyces cerevisiae
RGATCYVNN
NNBRGATCY
PBM, CSA and or DIP-chip
Mathelier et al.(2014)
MA0301.1
0.862
0.944
GAT3
M08565_2.00
Saccharomyces cerevisiae
RGATCYVNN
NNBRGATCY
Misc
DeBoer et al.(2011)
YLR013W_542
0.862
0.944
For this family, TFs with SR scores >
0.802
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
14781_YLR013W
GATA
70
106
CPQCAVVKTSPQWREGPDGQVTLCNACGLFYRKIFLV
Links
Other
GATA
family TFs
Other
Saccharomyces paradoxus
TFs
5 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
THAP6
Pan troglodytes
ENSPTRG00000039569
N
ENSOARG00000015330
Ovis aries
ENSOARG00000015330
N
THAP6
Oryctolagus cuniculus
ENSOCUG00000000368
N
THAP6
Otolemur garnettii
ENSOGAG00000011799
N
THAP6
Ochotona princeps
ENSOPRG00000012386
N
ENSPANG00000016871
Papio anubis
ENSPANG00000016871
N
THAP6
Procavia capensis
ENSPCAG00000016797
N
ENSPPYG00000014843
Pongo abelii
ENSPPYG00000014843
N
ENSPSIG00000008533
Pelodiscus sinensis
ENSPSIG00000008533
N
ENSNLEG00000007973
Nomascus leucogenys
ENSNLEG00000007973
N
THAP6
Pteropus vampyrus
ENSPVAG00000010162
N
Thap6
Rattus norvegicus
ENSRNOG00000058724
N
ENSSTOG00000012959
Ictidomys tridecemlineatus
ENSSTOG00000012959
N
THAP6
Tupaia belangeri
ENSTBEG00000011898
N
THAP6
Tursiops truncatus
ENSTTRG00000013788
N
THAP6
Vicugna pacos
ENSVPAG00000010703
N
ENSP00000309007
Macaca fascicularis
ENSP00000309007
N
Myotis_brandtii_THAP6_10008862
Myotis brandtii
Myotis_brandtii_THAP6_10008862
N
THAP6
Erinaceus europaeus
ENSEEUG00000009035
N
THAP6
Bos taurus
ENSBTAG00000007190
N
THAP6
Canis familiaris
ENSCAFG00000008331
N
THAP6
Choloepus hoffmanni
ENSCHOG00000011670
N
THAP6
Callithrix jacchus
ENSCJAG00000019942
N
ENSCSAG00000004714
Chlorocebus sabaeus
ENSCSAG00000004714
N
THAP6
Dasypus novemcinctus
ENSDNOG00000039501
N
ENSDORG00000003942
Dipodomys ordii
ENSDORG00000003942
N
THAP6
Equus caballus
ENSECAG00000015765
N
ENSAMEG00000014396
Ailuropoda melanoleuca
ENSAMEG00000014396
N
THAP6
Echinops telfairi
ENSETEG00000011422
N
THAP6
Felis catus
ENSFCAG00000008509
N
THAP6
Homo sapiens
ENSG00000174796
N
THAP6
Gorilla gorilla
ENSGGOG00000002489
N
THAP6
Loxodonta africana
ENSLAFG00000017346
N
THAP6
Myotis lucifugus
ENSMLUG00000012704
N
THAP6
Macaca mulatta
ENSMMUG00000009180
N
ENSMPUG00000009068
Mustela putorius furo
ENSMPUG00000009068
N