CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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maker-nMf.1.1.scaf21881-augustus-gene-0.3
(
Meloidogyne floridensis
)
GATA
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00320 (GATA)
IPR000679
maker-nMf.1.1.scaf21881-augustus-gene-0.3
T197637_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
maker-nMf.1.1.scaf21881-augustus-gene-0.3-mRNA-1
GATA
40
75
CFNCSAKHIKTKWHKYLKGHYLCHTCAVYSQKYGKH
maker-nMf.1.1.scaf21881-augustus-gene-0.3-mRNA-1
GATA
91
125
CSICNVTHTSHWYRDSKPGHYLCAACYKKQHKIKK
Links
Other
GATA
family TFs
Other
Meloidogyne floridensis
TFs
1 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ACEP20619
Atta cephalotes
ACEP20619
N
CapteG223464
Capitella teleta
CapteG223464
N
CGI_10008605
Crassostrea gigas
CGI_10008605
N
NV11692
Nasonia vitripennis
NV11692
N
SINV18073
Solenopsis invicta
SINV18073
N
ACUA024975
Anopheles culicifacies
ACUA024975
N
ADIR000569
Anopheles dirus
ADIR000569
N
AFUN001297
Anopheles funestus
AFUN001297
N
AMEC022445
Anopheles melas
AMEC022445
N
BGLB006807
Biomphalaria glabrata
BGLB006807
N