RSKR_0000556500 (Rhabditophanes kr3021)
GATA

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00320 (GATA) IPR000679 RSKR_0000556500 T197764_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
CBG13549
M01231_2.00 		Caenorhabditis briggsae
NTGATAAN
NTTATCAN		 PBM
Lambert et al.(2019)
pTH11492 		0.836 0.714
elt-6
M00666_2.00 		Caenorhabditis elegans
NTGATAAN
NTTATCAN		 PBM
Narasimhan et al.(2015)
pTH10707 		0.836 0.714
For this family, TFs with SR scores > 0.802 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
RSKR_0000556500.1 GATA 409 443

Links

Other GATA family TFs
Other Rhabditophanes kr3021 TFs

51 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Bm7937 Brugia malayi Bm7937 N
LOAG_08953 Loa loa LOAG_08953 N
WBGene00249464 Onchocerca volvulus WBGene00249464 N
BTMF_0000207501 Brugia timori BTMF_0000207501 N
EEL_0000995201 Elaeophora elaphi EEL_0000995201 N
nAv.1.0.1.g10193 Acanthocheilonema viteae nAv.1.0.1.g10193 N
nDi.2.2.2.g08208 Dirofilaria immitis nDi.2.2.2.g08208 N
nLs.2.1.2.g09793 Litomosoides sigmodontis nLs.2.1.2.g09793 N
nOo.2.0.1.g09010 Onchocerca ochengi nOo.2.0.1.g09010 N