CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
AB02466.1
(
Alternaria brassicicola
)
Grainyhead
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF04516 (CP2)
IPR007604
AB02466.1
T199619_2.00
Superfamily (2010-Oct-26)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
AB02466.1
Grainyhead
301
539
PAPPPPNQKSVTPSAQHSSYTDLPSFRYHVTLNAPTAMIKQSDEVPITYLNKGQAYSISLVDTAPMQASSPSTKYRTFIRISFEDEQQRQRPASCWQLWKEGRGTNEAHQRGGRLQAVEFVDPSQVSGGEIQGRPRVELESSSFDGFVVTWTPTHNASPECSLAVRFNFLSTDFSHSKGVKGIPVRLCSKTEMVTEATGASPQRPDAELCYCKVKLFRDHGAERKLSNDVAHVKKTIDK
Links
Other
Grainyhead
family TFs
Other
Alternaria brassicicola
TFs
12 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
COCC4DRAFT_73358
Bipolaris maydis
COCC4DRAFT_73358
N
0.811
COCCADRAFT_31661
Bipolaris zeicola
COCCADRAFT_31661
N
0.815
COCMIDRAFT_22708
Bipolaris oryzae
COCMIDRAFT_22708
N
0.806
COCSADRAFT_167842
Bipolaris sorokiniana
COCSADRAFT_167842
N
0.815
COCVIDRAFT_33378
Bipolaris victoriae
COCVIDRAFT_33378
N
0.815
LEMA_P094790.1
Leptosphaeria maculans
LEMA_P094790.1
N
0.762
MPH_12209
Macrophomina phaseolina
MPH_12209
N
0.709
PTRG_03180
Pyrenophora triticirepentis
PTRG_03180
N
0.796
PTT_11463
Pyrenophora teres
PTT_11463
N
0.794
SETTUDRAFT_45865
Setosphaeria turcica
SETTUDRAFT_45865
N
0.797
W97_08202
Coniosporium apollinis
W97_08202
N
0.702
estExt_fgenesh1_pm.C_100134
Cochliobolus heterostrophus C5
estExt_fgenesh1_pm.C_100134
N
0.811