CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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HPLM_0001248301
(
Haemonchus placei
)
Grainyhead
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF04516 (CP2)
IPR007604
HPLM_0001248301
T199701_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
HPLM_0001248301-mRNA-1
Grainyhead
175
397
EFFQTDTMLDRSAERALSHRDSPVVIPKLHNPLGFQYVLEAPISTSVRKEDDRMTYVNKGQFYTVSLDYIPDINKPLKSVTVKSQLMIVFREDKTYEEEIKTWQFWHSRQHSAKQRILEVDSKNSSGMIGQIEEIAHNAVQFYWNPSENGVKISIATQCLSTDFSNQKGVKGLPLHVQIDTYDGDNDKQPFHRGYCQIKVFCDKGAERKLRDEDKRNQKRKLA
Links
Other
Grainyhead
family TFs
Other
Haemonchus placei
TFs
38 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
CJA36291
Caenorhabditis japonica
CJA36291
N
PPA10006
Pristionchus pacificus
PPA10006
N
augustus_masked-nMf.1.1.scaf29399-processed-gene-0.0
Meloidogyne floridensis
augustus_masked-nMf.1.1.scaf29399-processed-gene-0.0
N
CGOC_0000108301
Cylicostephanus goldi
CGOC_0000108301
N
Hba_00666
Heterorhabditis bacteriophora
Hba_00666
N
L596_g25846
Steinernema carpocapsae
L596_g25846
N
SSTP_0000445600
Strongyloides stercoralis
SSTP_0000445600
N