CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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AMTR_s00088p00161000
(
Amborella trichopoda
)
GRAS
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF03514 (GRAS)
IPR005202
AMTR_s00088p00161000
T199802_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ERM99617
GRAS
188
558
IRKALVACAKAISDNDMPMADWLITELRQMVSVSGEPIQRLGAYMVEGLVARIASSGSAIYKSLRCKQPLASDLLSYMHVLYEVCPYFKFGYLSANGAIAEALKGEDRVHIIDFQIAQGTQWVTLIQALAARPGGPPYLRITGVDDPVSAYARGCGLELVGQRLAKLAKLCNVPFEFNAAAICGSQVEVGMLKVRPNDALAVNFPFQLHHMPDESVSTVNHRDRLLRMIKSLNPKVVTLVEQESNTNTAPFLHRFVEVLSYYSAVFESIDVTLPRDSKERISVEQHCLARDIVNVIACEGQERVERHELLGKWKLRFMMAGFSPYPLSSSVNSTIKSLLEGYCENYRLEEKDGVLYLGWKNRVLVASCAWR
Links
Other
GRAS
family TFs
Other
Amborella trichopoda
TFs
72 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
BGIOSGA014504
Oryza indica
BGIOSGA014504
N
0.000
LPERR04G18520
Leersia perrieri
LPERR04G18520
N
0.000
OGLUM04G22640
Oryza glumaepatula
OGLUM04G22640
N
0.000
OMERI04G19030
Oryza meridionalis
OMERI04G19030
N
0.000
ONIVA04G21910
Oryza nivara
ONIVA04G21910
N
0.000
OPUNC04G20350
Oryza punctata
OPUNC04G20350
N
0.000
ORGLA04G0197700
Oryza glaberrima
ORGLA04G0197700
N
0.000
ORUFI04G24440
Oryza rufipogon
ORUFI04G24440
N
0.000
OS04G0580300
Oryza sativa
OS04G0580300
N
0.000