CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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RGA
(
Arabidopsis thaliana
)
GRAS
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF03514 (GRAS)
IPR005202
AT2G01570
T199823_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
AT2G01570.1
GRAS
221
581
LVHALMACAEAIQQNNLTLAEALVKQIGCLAVSQAGAMRKVATYFAEALARRIYRLSPPQNQIDHCLSDTLQMHFYETCPYLKFAHFTANQAILEAFEGKKRVHVIDFSMNQGLQWPALMQALALREGGPPTFRLTGIGPPAPDNSDHLHEVGCKLAQLAEAIHVEFEYRGFVANSLADLDASMLELRPSDTEAVAVNSVFELHKLLGRPGGIEKVLGVVKQIKPVIFTVVEQESNHNGPVFLDRFTESLHYYSTLFDSLEGVPNSQDKVMSEVYLGKQICNLVACEGPDRVERHETLSQWGNRFGSSGLAPAHLGSNAFKQASMLLSVFNSGQGYRVEESNGCLMLGWHTRPLITTSAWK
Links
Other
GRAS
family TFs
Other
Arabidopsis thaliana
TFs
69 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Solyc10g078670.1
Solanum lycopersicum
Solyc10g078670.1
I
PGSC0003DMG400011430
Solanum tuberosum
PGSC0003DMG400011430
I
ORGLA09G0113500
Oryza glaberrima
ORGLA09G0113500
N
Pavir.J32240
Panicum virgatum
Pavir.J32240
N
Pavir.J08325
Panicum virgatum
Pavir.J08325
N
Pavir.Db00756
Panicum virgatum
Pavir.Db00756
N
Pavir.Ba01723
Panicum virgatum
Pavir.Ba01723
N
Traes_5BL_C08428870
Triticum aestivum
Traes_5BL_C08428870
N
Traes_5AL_39649C38E
Triticum aestivum
Traes_5AL_39649C38E
N
Si029606m.g
Setaria italica
Si029606m.g
N
Si022106m.g
Setaria italica
Si022106m.g
N
Si006417m.g
Setaria italica
Si006417m.g
N
Sb10g024190
Sorghum bicolor
Sb10g024190
N
Sb02g028380
Sorghum bicolor
Sb02g028380
N
OS09G0489500
Oryza sativa
OS09G0489500
N
ORUFI09G15880
Oryza rufipogon
ORUFI09G15880
N
BGIOSGA029546
Oryza indica
BGIOSGA029546
N
OPUNC09G13200
Oryza punctata
OPUNC09G13200
N
ONIVA08G17430
Oryza nivara
ONIVA08G17430
N
OMERI09G11450
Oryza meridionalis
OMERI09G11450
N
OGLUM09G15360
Oryza glumaepatula
OGLUM09G15360
N
OBART09G14730
Oryza barthii
OBART09G14730
N
OB09G21260
Oryza brachyantha
OB09G21260
N
OB09G12290
Oryza brachyantha
OB09G12290
N
MLOC_68986
Hordeum vulgare
MLOC_68986
N
LPERR09G10860
Leersia perrieri
LPERR09G10860
N
LPERR09G02550
Leersia perrieri
LPERR09G02550
N
GRMZM2G060290
Zea mays
GRMZM2G060290
N
GRMZM2G006578
Zea mays
GRMZM2G006578
N
GRMZM2G000842
Zea mays
GRMZM2G000842
N
BRADI4G33740
Brachypodium distachyon
BRADI4G33740
N