CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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SCL21
(
Arabidopsis thaliana
)
GRAS
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF03514 (GRAS)
IPR005202
AT2G04890
T199824_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
AT2G04890.1
GRAS
50
413
LKLVLVACAKAVSENNLLMARWCMGELRGMVSISGEPIQRLGAYMLEGLVARLAASGSSIYKSLQSREPESYEFLSYVYVLHEVCPYFKFGYMSANGAIAEAMKDEERIHIIDFQIGQGSQWIALIQAFAARPGGAPNIRITGVGDGSVLVTVKKRLEKLAKKFDVPFRFNAVSRPSCEVEVENLDVRDGEALGVNFAYMLHHLPDESVSMENHRDRLLRMVKSLSPKVVTLVEQECNTNTSPFLPRFLETLSYYTAMFESIDVMLPRNHKERINIEQHCMARDVVNIIACEGAERIERHELLGKWKSRFSMAGFEPYPLSSIISATIRALLRDYSNGYAIEERDGALYLGWMDRILVSSCAWK
Links
Other
GRAS
family TFs
Other
Arabidopsis thaliana
TFs
52 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
PAXRUDRAFT_15625
Paxillus rubicundulus
PAXRUDRAFT_15625
N
0.000
PLEOSDRAFT_1060467
Pleurotus ostreatus
PLEOSDRAFT_1060467
N
0.000
PISMIDRAFT_650733
Pisolithus microcarpus
PISMIDRAFT_650733
N
0.000
PISMIDRAFT_283095
Pisolithus microcarpus
PISMIDRAFT_283095
N
0.000
PILCRDRAFT_122351
Piloderma croceum
PILCRDRAFT_122351
N
0.000
PHLGIDRAFT_16085
Phlebiopsis gigantea
PHLGIDRAFT_16085
N
0.000
PHACADRAFT_83199
Phanerochaete carnosa
PHACADRAFT_83199
N
0.000
PHACADRAFT_254049
Phanerochaete carnosa
PHACADRAFT_254049
N
0.000
PAXRUDRAFT_33927
Paxillus rubicundulus
PAXRUDRAFT_33927
N
0.000
POSPLDRAFT_135054
Postia placenta
POSPLDRAFT_135054
N
0.000
MVLG_00837
Microbotryum violaceum
MVLG_00837
N
0.000
Moror_572
Moniliophthora roreri
Moror_572
N
0.000
Moror_346
Moniliophthora roreri
Moror_346
N
0.000
Moror_1174
Moniliophthora roreri
Moror_1174
N
0.000
M413DRAFT_237712
Hebeloma cylindrosporum
M413DRAFT_237712
N
0.000
M413DRAFT_216932
Hebeloma cylindrosporum
M413DRAFT_216932
N
0.000
M413DRAFT_13613
Hebeloma cylindrosporum
M413DRAFT_13613
N
0.000
SERLA73DRAFT_176212
Serpula lacrymans
SERLA73DRAFT_176212
N
0.000
gw1.1.1202.1
Heterobasidion annosum
gw1.1.1202.1
N
0.000
estExt_fgenesh3_kg.C_80174
Heterobasidion annosum
estExt_fgenesh3_kg.C_80174
N
0.000
e_gww2.7.722.1
Phanerochaete chrysosporium
e_gww2.7.722.1
N
0.000
e_gww2.5.562.1
Phanerochaete chrysosporium
e_gww2.5.562.1
N
0.000
e_gw1.7.560.1
Sporobolomyces roseus
e_gw1.7.560.1
N
0.000
e_gw1.12.266.1
Mucor circinelloides
e_gw1.12.266.1
N
0.000
V565_046740
Rhizoctonia solani
V565_046740
N
0.000
SERLA73DRAFT_66208
Serpula lacrymans
SERLA73DRAFT_66208
N
0.000
M404DRAFT_998133
Pisolithus tinctorius
M404DRAFT_998133
N
0.000
SCLCIDRAFT_36428
Scleroderma citrinum
SCLCIDRAFT_36428
N
0.000
SCLCIDRAFT_1225180
Scleroderma citrinum
SCLCIDRAFT_1225180
N
0.000
SCHCODRAFT_86194
Schizophyllum commune
SCHCODRAFT_86194
N
0.000
SCHCODRAFT_269947
Schizophyllum commune
SCHCODRAFT_269947
N
0.000
RHTO_01077
Rhodosporidium toruloides
RHTO_01077
N
0.000
POSPLDRAFT_135062
Postia placenta
POSPLDRAFT_135062
N
0.000
POSPLDRAFT_135057
Postia placenta
POSPLDRAFT_135057
N
0.000
CERSUDRAFT_115065
Ceriporiopsis subvermispora
CERSUDRAFT_115065
N
0.000
FOMPIDRAFT_1161920
Fomitopsis pinicola
FOMPIDRAFT_1161920
N
0.000
FOMPIDRAFT_1145789
Fomitopsis pinicola
FOMPIDRAFT_1145789
N
0.000
FOMPIDRAFT_1085863
Fomitopsis pinicola
FOMPIDRAFT_1085863
N
0.000
FOMPIDRAFT_1033652
Fomitopsis pinicola
FOMPIDRAFT_1033652
N
0.000
FIBRA_07597
Fibroporia radiculosa
FIBRA_07597
N
0.000
DICSQDRAFT_14849
Dichomitus squalens
DICSQDRAFT_14849
N
0.000
CY34DRAFT_809277
Suillus luteus
CY34DRAFT_809277
N
0.000
CNG02270
Cryptococcus neoformans
CNG02270
N
0.000
GALMADRAFT_233958
Galerina marginata
GALMADRAFT_233958
N
0.000
CERSUDRAFT_114830
Ceriporiopsis subvermispora
CERSUDRAFT_114830
N
0.000
CERSUDRAFT_109864
Ceriporiopsis subvermispora
CERSUDRAFT_109864
N
0.000
CC1G_08665
Coprinopsis cinerea
CC1G_08665
N
0.000
CC1G_03731
Coprinopsis cinerea
CC1G_03731
N
0.000
BOTBODRAFT_27262
Botryobasidium botryosum
BOTBODRAFT_27262
N
0.000
BOTBODRAFT_112907
Botryobasidium botryosum
BOTBODRAFT_112907
N
0.000
BN946_scf185001.g47
Trametes cinnabarina
BN946_scf185001.g47
N
0.000
AGABI2DRAFT_197789
Agaricus bisporus
AGABI2DRAFT_197789
N
0.000
GALMADRAFT_246744
Galerina marginata
GALMADRAFT_246744
N
0.000
GLOINDRAFT_156094
Rhizophagus irregularis
GLOINDRAFT_156094
N
0.000
GLOTRDRAFT_26554
Gloeophyllum trabeum
GLOTRDRAFT_26554
N
0.000
HETIRDRAFT_147959
Heterobasidion irregulare
HETIRDRAFT_147959
N
0.000
HETIRDRAFT_181137
Heterobasidion irregulare
HETIRDRAFT_181137
N
0.000
HYDPIDRAFT_99864
Hydnomerulius pinastri
HYDPIDRAFT_99864
N
0.000
JAAARDRAFT_209121
Jaapia argillacea
JAAARDRAFT_209121
N
0.000
JAAARDRAFT_288915
Jaapia argillacea
JAAARDRAFT_288915
N
0.000
K443DRAFT_104168
Laccaria amethystina
K443DRAFT_104168
N
0.000
K443DRAFT_676063
Laccaria amethystina
K443DRAFT_676063
N
0.000
L804_03638
Cryptococcus gattii
L804_03638
N
0.000
LACBIDRAFT_247901
Laccaria bicolor
LACBIDRAFT_247901
N
0.000
LACBIDRAFT_300881
Laccaria bicolor
LACBIDRAFT_300881
N
0.000
M378DRAFT_155533
Amanita muscaria
M378DRAFT_155533
N
0.000
M404DRAFT_1002106
Pisolithus tinctorius
M404DRAFT_1002106
N
0.000