CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Bo5g079990
(
Brassica oleracea
)
GRAS
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF03514 (GRAS)
IPR005202
Bo5g079990
T199936_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Bo5g079990.1
GRAS
13
318
LIGTLYECAKAVDNHDVAMTDWLISQLQQMVSVSGEPVQRLGAYMLEGLIAWLASSGSSIYKALRCRDPTGPELLTYLHILYEACPYFKFGYESANGAIAEAVKNERFVHIIDFQISQGGQWVSLIRALGARPGGPPRVRITGIDDPRSSFARQGGLELVGERLGKLAEMYGVPFEFRGAALCCTEVEIEKLGVRNSEALAVNFPLVLHHMPDESVTVENHRDRLLRLVKRLSPNVATLVEQEANTNTAPFLPRFVETMNHYLAVFESIDVKLARDHKERINVEQHCLAREVVNLVVCEGVEREEA
Links
Other
GRAS
family TFs
Other
Brassica oleracea
TFs
14 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Adf1
Drosophila melanogaster
FBgn0000054
D
GA13983
Drosophila pseudoobscura
FBgn0074015
I
GF11060
Drosophila ananassae
FBgn0088100
I
GG23211
Drosophila erecta
FBgn0115362
I
GI19291
Drosophila mojavensis
FBgn0142030
I
GL11108
Drosophila persimilis
FBgn0148718
I
GM20885
Drosophila sechellia
FBgn0175766
I
GD10415
Drosophila simulans
FBgn0182186
I
GJ22167
Drosophila virilis
FBgn0209280
I
GK23084
Drosophila willistoni
FBgn0225046
I
GE19065
Drosophila yakuba
FBgn0236427
I
LCUP004072
Lucilia cuprina
LCUP004072
I
LCUP004080
Lucilia cuprina
LCUP004080
I
MDOA005199
Musca domestica
MDOA005199
I
MDOA009315
Musca domestica
MDOA009315
I