CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Bo6g022200
(
Brassica oleracea
)
GRAS
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF03514 (GRAS)
IPR005202
Bo6g022200
T199939_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Bo6g022200.1
GRAS
96
484
LIHLLLTCANHVASGSLQNANAALEQLSLLSSPDGDTMQRVAAYFTEALANRILKSWPGLYKALNATQRKTNNVSEEVHVRRLFFDMFPILKVSYLLTNRAILEAMEGEKMVHVIDLDASEPAQWLALIQDFNSRPEGPPHLRITGVHHHKEVLDQMAHILTEEAEKLDIPFQFNPVVSSLESLNIDQLGVKTGEALAVSSVLQLHNFLASDEDILRKNGYSLSGDSASSLPLPNSGRISRFLNAMWSLSPKIMVVTEQDSDHNGSTLMERLLESLYTYAALFDCLEAKVPRTCQDRSKVEKMFFGEEIKNIIACEGSERRERHEKLEKWSQRIDLAGFGNVPLSYFAMLQGRRLLQGYGFDGYMIKEESGCAVICWQDRPLYSVSAWR
Links
Other
GRAS
family TFs
Other
Brassica oleracea
TFs
32 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
HCBG_05620
Histoplasma capsulatum
HCBG_05620
D
0.000
PVAR5_6560
Byssochlamys spectabilis
PVAR5_6560
I
0.000
MPH_04742
Macrophomina phaseolina
MPH_04742
I
0.000
MYCFIDRAFT_89500
Pseudocercospora fijiensis
MYCFIDRAFT_89500
I
0.000
Mycgr3G109237
Zymoseptoria tritici
Mycgr3G109237
I
0.000
OIDMADRAFT_116523
Oidiodendron maius
OIDMADRAFT_116523
I
0.000
PABG_06482
Paracoccidioides brasiliensis
PABG_06482
I
0.000
PCH_Pc22g23650
Penicillium rubens
PCH_Pc22g23650
I
0.000
PDE_03379
Penicillium oxalicum
PDE_03379
I
0.000
PDIP_61980
Penicillium digitatum
PDIP_61980
I
0.000
PEX1_027650
Penicillium expansum
PEX1_027650
I
0.000
PFICI_02807
Pestalotiopsis fici
PFICI_02807
I
0.000
PITC_053720
Penicillium italicum
PITC_053720
I
0.000
PTRG_05347
Pyrenophora triticirepentis
PTRG_05347
I
0.000
PTT_12674
Pyrenophora teres
PTT_12674
I
0.000
PV09_00253
Verruconis gallopava
PV09_00253
I
0.000
MCYG_00576
Microsporum canis
MCYG_00576
I
0.000
SEPMUDRAFT_146422
Sphaerulina musiva
SEPMUDRAFT_146422
I
0.000
SETTUDRAFT_102178
Setosphaeria turcica
SETTUDRAFT_102178
I
0.000
SNOG_07682
Phaeosphaeria nodorum
SNOG_07682
I
0.000
TEQG_05447
Trichophyton equinum
TEQG_05447
I
0.000
TESG_05799
Trichophyton tonsurans
TESG_05799
I
0.000
U727_00433250161
Penicillium solitum
U727_00433250161
I
0.000
UCRNP2_2338
Neofusicoccum parvum
UCRNP2_2338
I
0.000
W97_05539
Coniosporium apollinis
W97_05539
I
0.000
estExt_fgenesh1_pg.C_20199
Cochliobolus heterostrophus C5
estExt_fgenesh1_pg.C_20199
I
0.000
estExt_fgenesh1_pg.C_chr_40524
Mycosphaerella graminicola
estExt_fgenesh1_pg.C_chr_40524
I
0.000
synt_with_mycgr.1__94
Mycosphaerella fijiensis
synt_with_mycgr.1__94
I
0.000
AB06986.1
Alternaria brassicicola
AB06986.1
I
0.000
fgenesh1_pm.00855_#_114
Aspergillus carbonarius
fgenesh1_pm.00855_#_114
I
0.000
Pc22g23650
Penicillium chrysogenum
Pc22g23650
I
0.000
COCSADRAFT_21477
Bipolaris sorokiniana
COCSADRAFT_21477
I
0.000
CIMG_05854
Coccidioides immitis
CIMG_05854
I
0.000
SNOG_07682
Stagonospora nodorum
SNOG_07682
I
0.000
AOL_s00004g648
Arthrobotrys oligospora
AOL_s00004g648
I
0.000
ARB_01992
Arthroderma benhamiae
ARB_01992
I
0.000
AUEXF2481DRAFT_8523
Aureobasidium subglaciale
AUEXF2481DRAFT_8523
I
0.000
BDDG_07136
Blastomyces dermatitidis
BDDG_07136
I
0.000
ACLA_098160
Aspergillus clavatus
CADACLAG00009206
I
0.000
CADAFLAG00008794
Aspergillus flavus
CADAFLAG00008794
I
0.000
AFUA_6G02330
Aspergillus fumigatus
CADAFUAG00000640
I
0.000
CADANGAG00010285
Aspergillus niger
CADANGAG00010285
I
0.000
ATEG_07219
Aspergillus terreus
CADATEAG00001089
I
0.000
NFIA_048590
Neosartorya fischeri
CADNFIAG00005471
I
0.000
COCC4DRAFT_55544
Bipolaris maydis
COCC4DRAFT_55544
I
0.000
COCMIDRAFT_81911
Bipolaris oryzae
COCMIDRAFT_81911
I
0.000
MGYG_01386
Microsporum gypseum
MGYG_01386
I
0.000
COCVIDRAFT_21164
Bipolaris victoriae
COCVIDRAFT_21164
I
0.000
CPC735_024740
Coccidioides posadasii
CPC735_024740
I
0.000
DOTSEDRAFT_68063
Dothistroma septosporum
DOTSEDRAFT_68063
I
0.000
EURHEDRAFT_452525
Aspergillus ruber
EURHEDRAFT_452525
I
0.000
GSTUM_00012177001
Tuber melanosporum
GSTUM_00012177001
I
0.000
H101_06341
Trichophyton interdigitale
H101_06341
I
0.000
H102_07503
Trichophyton rubrum
H102_07503
I
0.000
H105_07531
Trichophyton soudanense
H105_07531
I
0.000
LEMA_P039610.1
Leptosphaeria maculans
LEMA_P039610.1
I
0.000
M437DRAFT_72508
Aureobasidium melanogenum
M437DRAFT_72508
I
0.000
M438DRAFT_354465
Aureobasidium pullulans
M438DRAFT_354465
I
0.000
MBM_09565
Marssonina brunnea
MBM_09565
I
0.000
MCYG_00576
Arthroderma otae
MCYG_00576
I
0.000
MGG_02962
Magnaporthe oryzae
MGG_02962
N
0.000