CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Bra011700
(
Brassica rapa
)
GRAS
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF03514 (GRAS)
IPR005202
Bra011700
T199974_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Bra011700.1-P
GRAS
121
486
FVEDLIRVVDCVESDELQLAQVILSRLNQRLRSPAGRPLQRAAFYFKEALGSLLTGSNRNQTRLLSSWTEIVQKIRAVKEFSGISPIPLFSHFTANQAILDSLNSQTSSSPFVHVVDFDVGFGGQYASLMREIAEKSISSGFLRVTAVVAEECAVETRLVKENLTQFAAEMKIRFQIEFVLMKTFEMLSFKAIRFVDGERTVVLISPAIFRRLSGIAEFVTNLRRVSPKVVVFVDSEGWTEIAGAGSFRREFVTALEFYTMVLESLDAAAPPGDLVKKIVEAFVLRPKIVAAVETAGDRRNVGEMTWREAFCGAGMRSIQLSQFAIFQAECLLEKAQVRGFHVAKRQEELVLCWHGRALVATSAWS
Links
Other
GRAS
family TFs
Other
Brassica rapa
TFs
14 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
fgenesh_scip_prom.28083.2971
Phytophthora lateralis
fgenesh_scip_prom.28083.2971
N
fgenesh_scip_prom.46568.5233
Phytophthora kernoviae
fgenesh_scip_prom.46568.5233
N
maker-par_contig_1092-snap-gene-0.3
Pythium arrhenomanes
maker-par_contig_1092-snap-gene-0.3
N
maker-pir_contig_1879-fgenesh-gene-0.1
Pythium irregulare
maker-pir_contig_1879-fgenesh-gene-0.1
N
Phyra81622
Phytophthora ramorum
Phyra81622
N
Physo130513
Phytophthora sojae
Physo130513
N
PYU1_G005942
Pythium ultimum
PYU1_G005942
N
estExt_Genewise1Plus.C_110227
Phytophthora capsici
estExt_Genewise1Plus.C_110227
N