CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Bra028391
(
Brassica rapa
)
GRAS
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF03514 (GRAS)
IPR005202
Bra028391
T200002_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Bra028391.1-P
GRAS
242
618
FRTLLTHCAQAISTGDKTTALDLLLQIRQDSSPMGDASQRLAHCFANALEARLRGSPVIQTYYNAITSLKETASDILKAYRVYLSSSPFVTLMYFFSFRMILDAAKDAEVLHIVDFGILYGFQWPMFIQYMSGRKDVPRKLRITGIELPQRGLRPAERIEETGRRLAEYCKRFNVPFEYKAIASQHWESIRLDEFNIRPGEVLAVNAGLRLKTLQDETGGEETCPRDAVLKLIRKMNPDVFVHAIVNGSFNAPFFISRFKEAVYHYYALFDMFDSTLPRDNQERIRFEREFYGREAMNVIACEEGDRVERPETYRQWQVRMVRAGFKQKPVRDEIVELFREKLKKWRYHKDFVVDENSKWLLQGWKGRTLYASSCWV
Links
Other
GRAS
family TFs
Other
Brassica rapa
TFs
15 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ENSPPYG00000000739
Pongo abelii
ENSPPYG00000000739
N
Tal_R003028
Tyto alba
Tal_R003028
N
Pvit_09430
Pogona vitticeps
Pvit_09430
N
Gfo_R008793
Geospiza fortis
Gfo_R008793
N
ENSBTAP00000027126-D1
Bos grunniens
ENSBTAP00000027126-D1
N
Cmyd_10002667
Chelonia mydas
Cmyd_10002667
N
Brh_R006609
Buceros rhinoceros
Brh_R006609
N
Afo_R013206
Aptenodytes forsteri
Afo_R013206
N
Aan_R002406
Calypte anna
Aan_R002406
N
ENSTGUG00000017414
Taeniopygia guttata
ENSTGUG00000017414
N
Gon4l
Rattus norvegicus
ENSRNOG00000020297
N
ENSAMEG00000000043
Ailuropoda melanoleuca
ENSAMEG00000000043
N
ENSOCUG00000010191
Oryctolagus cuniculus
ENSOCUG00000010191
N
ENSOARG00000004747
Ovis aries
ENSOARG00000004747
N
Gon4l
Mus musculus
ENSMUSG00000054199
N
ENSMGAG00000000803
Meleagris gallopavo
ENSMGAG00000000803
N
ENSGALG00000014643
Gallus gallus
ENSGALG00000014643
N
ENSFALG00000002782
Ficedula albicollis
ENSFALG00000002782
N
ENSCAFG00000016929
Canis familiaris
ENSCAFG00000016929
N
ENSBTAG00000020356
Bos taurus
ENSBTAG00000020356
N
ENSAPLG00000014097
Anas platyrhynchos
ENSAPLG00000014097
N