CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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GLYMA12G16750
(
Glycine max
)
GRAS
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF03514 (GRAS)
IPR005202
GLYMA12G16750
T200211_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
GLYMA12G16750.2
GRAS
198
568
LKQLLIVCAKALSENNMQHFDQLIEKARSAVSITGEPIQRLGAYLVEGLVARKEASGNNIYHALRCREPEGKDLLSYMQLLYEICPYLKFGYMAANGAIAEACRNEDQIHIIDFQIGQGTQWVTLLQALAARPGGAPHVRITGIDDPLSKYVRGDGLEAVGKRLAAISQTFNIRVEFHGVPVLAPDVTKDVLDVRPGEALAVNFPLQLHHTADESVDMSNPRDGLLRLVKSLSPKVTTLVEQESNTNTTPFFNRFIETLDYYLAMFESIDVSLPRKSKVQINMEQHCLARDIVNIIACEGKERVERHELLGKWKSRLTMAGFRQYPLSSYMNSVIRSLLRCYSKHYNLVEKDGAMLLGWKDRNLISTSAWY
GLYMA12G16750.3
GRAS
140
510
LKQLLIVCAKALSENNMQHFDQLIEKARSAVSITGEPIQRLGAYLVEGLVARKEASGNNIYHALRCREPEGKDLLSYMQLLYEICPYLKFGYMAANGAIAEACRNEDQIHIIDFQIGQGTQWVTLLQALAARPGGAPHVRITGIDDPLSKYVRGDGLEAVGKRLAAISQTFNIRVEFHGVPVLAPDVTKDVLDVRPGEALAVNFPLQLHHTADESVDMSNPRDGLLRLVKSLSPKVTTLVEQESNTNTTPFFNRFIETLDYYLAMFESIDVSLPRKSKVQINMEQHCLARDIVNIIACEGKERVERHELLGKWKSRLTMAGFRQYPLSSYMNSVIRSLLRCYSKHYNLVEKDGAMLLGWKDRNLISTSAWY
Links
Other
GRAS
family TFs
Other
Glycine max
TFs
59 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Eucgr.F03414
Eucalyptus grandis
Eucgr.F03414
N
0.818
Solyc12g005340.1
Solanum lycopersicum
Solyc12g005340.1
N
0.772
TCM_031132
Theobroma cacao
TCM_031132
N
0.873
Traes_2AS_620B821281
Triticum aestivum
Traes_2AS_620B821281
N
0.724
Traes_2BS_4600D4B54
Triticum aestivum
Traes_2BS_4600D4B54
N
0.734
Traes_2DS_2D035BAFD
Triticum aestivum
Traes_2DS_2D035BAFD
N
0.726
TRIUR3_35245
Triticum urartu
TRIUR3_35245
N
0.726
VIT_19s0014g04940
Vitis vinifera
VIT_19s0014g04940
N
0.848
Ca_06943
Cicer arietinum
Ca_06943
N
0.843
Pm029452
Prunus mume
Pm029452
N
0.856
cassava24578.valid.m1
Manihot esculenta
cassava24578.valid.m1
N
0.824
Cucsa.053270
Cucumis sativus
Cucsa.053270
N
0.805
mgf007614m
Mimulus guttatus
mgf007614m
N
0.764
Aquca_005_00404
Aquilegia coerulea
Aquca_005_00404
N
0.751
Ciclev10007843m.g
Citrus clementina
Ciclev10007843m.g
N
0.808
Solyc07g063940.1
Solanum lycopersicum
Solyc07g063940.1
N
0.805
gene03285-v1.0-hybrid
Fragaria vesca
gene03285-v1.0-hybrid
N
0.859
Gorai.002G080600
Gossypium raimondii
Gorai.002G080600
N
0.843
Gorai.009G427800
Gossypium raimondii
Gorai.009G427800
N
0.802
Gorai.013G164700
Gossypium raimondii
Gorai.013G164700
N
0.848
Lus10035840.g
Linum usitatissimum
Lus10035840.g
N
0.799
Lus10036623.g
Linum usitatissimum
Lus10036623.g
N
0.786
MDP0000205622
Malus domestica
MDP0000205622
N
0.856
orange1.1g040563m.g
Citrus sinensis
orange1.1g040563m.g
N
0.833
Pavir.Bb02923
Panicum virgatum
Pavir.Bb02923
N
0.745
Pavir.J35699
Panicum virgatum
Pavir.J35699
N
0.745
SapurV1A.0327s0070
Salix purpurea
SapurV1A.0327s0070
N
0.802
SapurV1A.0664s0120
Salix purpurea
SapurV1A.0664s0120
N
0.775
SapurV1A.3085s0020
Salix purpurea
SapurV1A.3085s0020
N
0.813
PK07026.1
Cannabis sativa
PK07026.1
N
0.813
OLONG_024541
Oryza longistaminata
OLONG_024541
N
0.729
BGIOSGA025902
Oryza indica
BGIOSGA025902
N
0.729
BRADI1G25370
Brachypodium distachyon
BRADI1G25370
N
0.740
F775_07373
Aegilops tauschii
F775_07373
N
0.726
GLYMA06G41500
Glycine max
GLYMA06G41500
N
0.954
GLYMA12G34420
Glycine max
GLYMA12G34420
N
0.854
GLYMA13G36120
Glycine max
GLYMA13G36120
N
0.856
GRMZM5G821439
Zea mays
GRMZM5G821439
N
0.745
GSMUA_Achr6G24310_001
Musa acuminata
GSMUA_Achr6G24310_001
N
0.734
MLOC_37712
Hordeum vulgare
MLOC_37712
N
0.734
MTR_2g082090
Medicago truncatula
MTR_2g082090
N
0.840
OB07G23640
Oryza brachyantha
OB07G23640
N
0.743
OBART07G17780
Oryza barthii
OBART07G17780
N
0.726
OGLUM07G17420
Oryza glumaepatula
OGLUM07G17420
N
0.729
AMTR_s00043p00136400
Amborella trichopoda
AMTR_s00043p00136400
N
0.737
OMERI07G14660
Oryza meridionalis
OMERI07G14660
N
0.732
ONIVA07G16090
Oryza nivara
ONIVA07G16090
N
0.729
OPUNC07G16570
Oryza punctata
OPUNC07G16570
N
0.734
ORGLA07G0142600
Oryza glaberrima
ORGLA07G0142600
N
0.726
ORUFI07G18480
Oryza rufipogon
ORUFI07G18480
N
0.729
CIGR1
Oryza sativa
OS07G0545800
N
0.726
PGSC0003DMG400019232
Solanum tuberosum
PGSC0003DMG400019232
N
0.802
PGSC0003DMG400021802
Solanum tuberosum
PGSC0003DMG400021802
N
0.772
POPTR_0001s44090
Populus trichocarpa
POPTR_0001s44090
N
0.818
POPTR_0011s13460
Populus trichocarpa
POPTR_0011s13460
N
0.827
PRUPE_ppa003323mg
Prunus persica
PRUPE_ppa003323mg
N
0.867
Sb02g035680
Sorghum bicolor
Sb02g035680
N
0.743
Si029156m.g
Setaria italica
Si029156m.g
N
0.745