CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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OBART12G16530
(
Oryza barthii
)
GRAS
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF03514 (GRAS)
IPR005202
OBART12G16530
T200681_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
OBART12G16530.1
GRAS
265
637
LRTLLIHCAQAVATDDRRSATELLKQIKQHAKPTGDATQRLAHCFAEGLQARIAGTGSLVHQSLVAKRTSAVDILQAYQLYMAAICFKKVSFIFSNQTIYNASLGKKKIHIVDYGIQYGFQWPCFLRRISQREGGPPEVRMTGIDLPQPGFRPTERIEETGHRLSKYAQEFGVPFKYNAIAAVKMESVRKEDLNIDPDEVLIVNCQYQFKNLMDESVVIDSPRDIVLSNIRKMQPHVFIHAIVNGSFSAPFFVTRFREALFFYSALFDVLDATTPRESEQRLLIEQNIFGRAALNVIACEGIDRVERPETYKQWQVRNQRAGFKQLPLNPEIVQVVRNKVKDCYHKDFVIDIDHQWLLQGWKGRILYAISTWT
Links
Other
GRAS
family TFs
Other
Oryza barthii
TFs
29 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
GLYMA03G34970
Glycine max
GLYMA03G34970
N
GLYMA13G21560
Glycine max
GLYMA13G21560
N
GLYMA15G02900
Glycine max
GLYMA15G02900
N
GLYMA19G37670
Glycine max
GLYMA19G37670
N
POPTR_0006s02180
Populus trichocarpa
POPTR_0006s02180
N
POPTR_0016s02010
Populus trichocarpa
POPTR_0016s02010
N
TCM_022462
Theobroma cacao
TCM_022462
N
HRD
Vitis vinifera
VIT_08s0007g03810
N
Ca_00768
Cicer arietinum
Ca_00768
N
29092.m000462
Ricinus communis
29092.m000462
N
Gorai.009G407200
Gossypium raimondii
Gorai.009G407200
N
Lus10014376.g
Linum usitatissimum
Lus10014376.g
N
Lus10023873.g
Linum usitatissimum
Lus10023873.g
N
MDP0000195376
Malus domestica
MDP0000195376
N
SapurV1A.0154s0220
Salix purpurea
SapurV1A.0154s0220
N
LjSGA_035548.1
Lotus japonicus
LjSGA_035548.1
N