CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
OGLUM04G23390
(
Oryza glumaepatula
)
GRAS
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF03514 (GRAS)
IPR005202
OGLUM04G23390
T200706_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
OGLUM04G23390.1
GRAS
261
634
LTTLLIHCAQAAAIDDHRNSNELLKQIRQRSSAYGDAGQRLAHCFANALEARLAGTGSNIYRSLAAKRTSVYDILNAFKLYVTACPFKKISNFFSIEAILNASKGMTRLHIVDYGIQYGFQWPIFFQRISKRPGGPPSVRITGVDLPQPGFRPAQLIEATGRRLHDYARMFNVPFEYHAIAAKWDTIRVEDLKIDKDKDELLVVNCLFRMRNMMDEMVTDDSPRMQVLKTIRKMNPNLFIHGVVNGTYNAPFFVTRFKEALFYYSSLFDMLETTASRVDENRLLIERDLFGREALNVVACEGTERVERPETYKQWQVRNIRAGFKQLPLNQETVKKARYKVKKSYHRDFLVDEDNKWMLQGWKGRIIFALSAWE
Links
Other
GRAS
family TFs
Other
Oryza glumaepatula
TFs
21 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
OPUNC04G20980
Oryza punctata
OPUNC04G20980
N
0.981
PDK_20s1329542g002
Phoenix dactylifera
PDK_20s1329542g002
N
0.712
Pavir.J16240
Panicum virgatum
Pavir.J16240
N
0.773
Pavir.Ia00281
Panicum virgatum
Pavir.Ia00281
N
0.765
Traes_5BL_DF8EC4A24
Triticum aestivum
Traes_5BL_DF8EC4A24
N
0.776
Traes_5AL_9AE0ED26A
Triticum aestivum
Traes_5AL_9AE0ED26A
N
0.865
Si034627m.g
Setaria italica
Si034627m.g
N
0.778
Sb01g003110
Sorghum bicolor
Sb01g003110
N
0.757
OS04G0590400
Oryza sativa
OS04G0590400
N
1.000
ORUFI04G25140
Oryza rufipogon
ORUFI04G25140
N
1.000
ORGLA04G0200000
Oryza glaberrima
ORGLA04G0200000
N
0.997
BGIOSGA017023
Oryza indica
BGIOSGA017023
N
1.000
ONIVA04G22790
Oryza nivara
ONIVA04G22790
N
1.000
OLONG_013234
Oryza longistaminata
OLONG_013234
N
0.995
OBART04G23460
Oryza barthii
OBART04G23460
N
0.995
OB04G30360
Oryza brachyantha
OB04G30360
N
0.965
MLOC_2933
Hordeum vulgare
MLOC_2933
N
0.781
LPERR04G19190
Leersia perrieri
LPERR04G19190
N
0.941
GRMZM2G368909
Zea mays
GRMZM2G368909
N
0.759
F775_04155
Aegilops tauschii
F775_04155
N
0.784
BRADI1G03620
Brachypodium distachyon
BRADI1G03620
N
0.824